[med-svn] [Git][med-team/beast2-mcmc][master] 6 commits: Try two patches that might allow using antlr version 4.5 but failed

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / beast2-mcmc


Commits:
ed00a43c by Andreas Tille at 2018-10-15T07:55:19Z
Try two patches that might allow using antlr version 4.5 but failed

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788d69cf by Andreas Tille at 2018-10-15T08:03:17Z
New upstream version 2.5.1+dfsg
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58f33850 by Andreas Tille at 2018-10-15T08:03:36Z
Update upstream source from tag 'upstream/2.5.1+dfsg'

Update to upstream version '2.5.1+dfsg'
with Debian dir 82b62b7d44ae148133b43f8c046d3c524cb775bc
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1502a954 by Andreas Tille at 2018-10-15T08:03:36Z
New upstream version

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7228f92b by Andreas Tille at 2018-10-15T08:03:42Z
Standards-Version: 4.2.1

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694dc530 by Andreas Tille at 2018-10-15T09:16:24Z
Merge changelog entries

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30 changed files:

- − .classpath
- .gitignore
- Dockerfile
- README.md
- build.xml
- debian/changelog
- debian/control
- + debian/patches/revert_NewickLexer.java_to_antlr_4.5.patch
- + debian/patches/reverted_to_antlr_4.5_deacdc96.patch
- debian/patches/series
- release/Linux/bin/applauncher
- release/Linux/bin/beast
- release/Linux/bin/beauti
- release/Linux/bin/densitree
- release/Linux/bin/loganalyser
- release/Linux/bin/logcombiner
- release/Linux/bin/packagemanager
- release/Linux/bin/treeannotator
- + release/Mac/launch.c
- release/common/README.txt
- release/common/VERSION HISTORY.txt
- src/beast/app/BEASTVersion.java
- src/beast/app/BEASTVersion2.java
- src/beast/app/BeastMCMC.java
- src/beast/app/DocMaker.java
- src/beast/app/beastapp/BeastLauncher.java
- src/beast/app/beastapp/BeastMain.java
- src/beast/app/beauti/AlignmentViewer.java
- src/beast/app/beauti/Beauti.java
- src/beast/app/beauti/GuessPatternDialog.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/compare/1ffe4cf35fea7a47cd096707f5718f64be37ff27...694dc530e0aa4d4c9162348a5051501d8e385c98

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View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/compare/1ffe4cf35fea7a47cd096707f5718f64be37ff27...694dc530e0aa4d4c9162348a5051501d8e385c98
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