[med-svn] [Git][med-team/plip][master] Getting plipcmd to work

Steffen Möller gitlab at salsa.debian.org
Wed Oct 17 10:55:34 BST 2018


Steffen Möller pushed to branch master at Debian Med / plip


Commits:
9a4faf7e by Steffen Möller at 2018-10-17T09:50:48Z
Getting plipcmd to work

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/executableIsForPython2Not3.patch
- + debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,6 +1,11 @@
-plip (1.4.3~b+dfsg-2) UNRELEASED; urgency=medium
+plip (1.4.3~b+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
 
   * Hopefully fixed d/watch - who knows :o)
+  * Executable only works with python2, not 3
+  * Explicitly adding python-openbabel as a dependency to the binary
+    package, which was omitted by the automatisms in place.
 
  -- Steffen Moeller <moeller at debian.org>  Tue, 16 Oct 2018 16:21:48 +0200
 


=====================================
debian/control
=====================================
@@ -20,7 +20,8 @@ Homepage: https://projects.biotec.tu-dresden.de/plip-web/plip/
 Package: plip
 Architecture: all
 Depends: ${misc:Depends},
-         ${python:Depends}
+         ${python:Depends},
+         python-openbabel
 Suggests: pymol
 Description: fully automated protein-ligand interaction profiler
  The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze


=====================================
debian/patches/executableIsForPython2Not3.patch
=====================================
@@ -0,0 +1,10 @@
+Index: plip/plip/plipcmd.py
+===================================================================
+--- plip.orig/plip/plipcmd.py
++++ plip/plip/plipcmd.py
+@@ -1,4 +1,4 @@
+-#! /usr/bin/env python
++#!/usr/bin/python2
+ """
+ Protein-Ligand Interaction Profiler - Analyze and visualize protein-ligand interactions in PDB files.
+ plipcmd.py - Main script for PLIP command line execution.


=====================================
debian/patches/series
=====================================
@@ -0,0 +1 @@
+executableIsForPython2Not3.patch



View it on GitLab: https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa

-- 
View it on GitLab: https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa
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