[med-svn] [Git][med-team/igv][master] 3 commits: Maintain Files-Excluded: Do not mention files not in tarball any more, remove more unused jars

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / igv


Commits:
b210ec35 by Andreas Tille at 2018-10-18T18:21:33Z
Maintain Files-Excluded: Do not mention files not in tarball any more, remove more unused jars

- - - - -
819a716b by Andreas Tille at 2018-10-18T18:21:33Z
New upstream version 2.4.14+dfsg
- - - - -
ca2037eb by Andreas Tille at 2018-10-18T18:21:33Z
No team upload

- - - - -


8 changed files:

- debian/changelog
- debian/copyright
- − lib/ant.jar
- − lib/htsjdk-2.12.0-18-g20ee53e-SNAPSHOT.jar
- − lib/picard-lib.jar
- − lib/snappy-java-1.1.4.jar
- − test/lib/fest-Assert-1.2.jar
- − test/lib/junit-4.10.jar


Changes:

=====================================
debian/changelog
=====================================
@@ -1,7 +1,6 @@
 igv (2.4.14+dfsg-1) UNRELEASED; urgency=medium
 
   [ Dylan Aïssi ]
-  * Team upload.
   * Add more libraries deps in classpath
       (LP: #1400648, #1476650, #1602389)
 
@@ -14,7 +13,10 @@ igv (2.4.14+dfsg-1) UNRELEASED; urgency=medium
     (Thanks for the hint to Tony Travis <tony.travis at minke-informatics.co.uk>)
     (LP: #1797819)
   * XS-Autobuild: yes
-  * d/copyright: jlfgr is now available as source code not binary jar
+  * d/copyright: Maintain Files-Excluded:
+     - jlfgr is now available as source code not binary jar
+     - do not mention files not in tarball any more
+     - remove more unused jars
 
   [ Olivier Sallou]
   * d/patches/fix_gradle.patch: adapt build to Debian


=====================================
debian/copyright
=====================================
@@ -1,31 +1,21 @@
 Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Source: http://www.broadinstitute.org/igv/projects/downloads
 Files-Excluded:
-    igv.jar
-    batik-codec.jar
-    igv.bat
-    igv.command
-    lib/Jama-*
     lib/batik*
     lib/commons*
-    lib/concurrent*
     lib/guava*
-    lib/jargs*
+    */htsjdk*.jar
     lib/jcommon*
     lib/jfreechart*
-    lib/junit-*
+    */junit-*.jar
     lib/log4j-*
-    lib/sam-*
+    */picard-*.jar
+    */snappy-java-*.jar
     lib/swing-layout-*
-    lib/xml-apis-*
-    lib/bcprov*
-    lib/jgrapht*
     lib/jide-oss-*
-    lib/cofoja*
-    lib/mysql-connector*
     lib/gson*
-    test/lib/ant.jar
-    test/lib/fest-assert*.jar
+    */ant.jar
+    */fest-Assert*.jar
     test/lib/fest-util*.jar
     test/lib/fest-reflect*.jar
 Disclaimer: This package is not part of the Debian operating system.
@@ -36,7 +26,7 @@ Disclaimer: This package is not part of the Debian operating system.
  for non-free packages (such as our bug tracking system and mailing lists).
 
 Files: *
-Copyright: 2007-2015 Broad Institute
+Copyright: 2007-2018 Broad Institute
 License: MIT
  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
  IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
@@ -95,7 +85,10 @@ License: other
  such jurisdiction.
 
 Files: debian/*
-Copyright: 2010 Shaun Jackman <sjackman at debian.org>
+Copyright: 2010-2011 Shaun Jackman <sjackman at debian.org>
+           2011 Charles Plessy <plessy at debian.org>
+           2013-2018 Olivier Sallou <osallou at debian.org>,
+                     Andreas Tille <tille at debian.org>
 License: ISC
  Permission to use, copy, modify, and/or distribute this software for any
  purpose with or without fee is hereby granted, provided that the above


=====================================
lib/ant.jar deleted
=====================================
Binary files a/lib/ant.jar and /dev/null differ


=====================================
lib/htsjdk-2.12.0-18-g20ee53e-SNAPSHOT.jar deleted
=====================================
Binary files a/lib/htsjdk-2.12.0-18-g20ee53e-SNAPSHOT.jar and /dev/null differ


=====================================
lib/picard-lib.jar deleted
=====================================
Binary files a/lib/picard-lib.jar and /dev/null differ


=====================================
lib/snappy-java-1.1.4.jar deleted
=====================================
Binary files a/lib/snappy-java-1.1.4.jar and /dev/null differ


=====================================
test/lib/fest-Assert-1.2.jar deleted
=====================================
Binary files a/test/lib/fest-Assert-1.2.jar and /dev/null differ


=====================================
test/lib/junit-4.10.jar deleted
=====================================
Binary files a/test/lib/junit-4.10.jar and /dev/null differ



View it on GitLab: https://salsa.debian.org/med-team/igv/compare/159487636c008f8b5d7a318e27836bf9ca278702...ca2037eb5075b7f50961313e9e2fc7e21ce3687e

-- 
View it on GitLab: https://salsa.debian.org/med-team/igv/compare/159487636c008f8b5d7a318e27836bf9ca278702...ca2037eb5075b7f50961313e9e2fc7e21ce3687e
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20181018/970b3639/attachment-0001.html>