[med-svn] [Git][med-team/beast2-mcmc][master] 2 commits: Use secure copyright file specification URI.

[Jelmer Vernooij]

Jelmer Vernooij pushed to branch master at Debian Med / beast2-mcmc


Commits:
2a45cc6f by Jelmer Vernooij at 2018-10-20T13:11:25Z
Use secure copyright file specification URI.

Fixes lintian: insecure-copyright-format-uri
See https://lintian.debian.org/tags/insecure-copyright-format-uri.html for more details.

- - - - -
333d6547 by Jelmer Vernooij at 2018-10-20T13:11:25Z
Trim trailing whitespace.

Fixes lintian: file-contains-trailing-whitespace
See https://lintian.debian.org/tags/file-contains-trailing-whitespace.html for more details.

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/copyright


Changes:

=====================================
debian/changelog
=====================================
@@ -3,7 +3,7 @@ beast2-mcmc (2.5.1+dfsg-1) UNRELEASED; urgency=medium
   [ Steffen Moeller ]
   * d/u/metadata:
     - added RRIDs
-    - yamllint cleanliness 
+    - yamllint cleanliness
 
   [ Andreas Tille ]
   * New upstream version
@@ -15,6 +15,10 @@ beast2-mcmc (2.5.1+dfsg-1) UNRELEASED; urgency=medium
   * d/rules: Add antlr4-runtime.jar to CLASS_PATH
   * Standards-Version: 4.2.1
 
+  [ Jelmer Vernooij ]
+  * Use secure copyright file specification URI.
+  * Trim trailing whitespace.
+
  -- Andreas Tille <tille at debian.org>  Mon, 15 Oct 2018 10:03:36 +0200
 
 beast2-mcmc (2.4.4+dfsg-1) unstable; urgency=medium


=====================================
debian/control
=====================================
@@ -31,14 +31,14 @@ Depends: ${shlibs:Depends},
          default-jre | java9-runtime
 Suggests: beast2-mcmc-doc
 Description: Bayesian MCMC phylogenetic inference
- BEAST is a cross-platform program for Bayesian MCMC analysis of molecular 
- sequences. It is entirely orientated towards rooted, time-measured 
+ BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
+ sequences. It is entirely orientated towards rooted, time-measured
  phylogenies inferred using strict or relaxed molecular clock models. It
- can be used as a method of reconstructing phylogenies but is also a 
- framework for testing evolutionary hypotheses without conditioning on a 
- single tree topology. BEAST uses MCMC to average over tree space, so that 
- each tree is weighted proportional to its posterior probability. Included 
- is a simple to use user-interface program for setting up standard 
+ can be used as a method of reconstructing phylogenies but is also a
+ framework for testing evolutionary hypotheses without conditioning on a
+ single tree topology. BEAST uses MCMC to average over tree space, so that
+ each tree is weighted proportional to its posterior probability. Included
+ is a simple to use user-interface program for setting up standard
  analyses and a suit of programs for analysing the results.
  .
  This is no new upstream version of beast-mcmc (1.x) but rather a rewritten
@@ -51,14 +51,14 @@ Depends: ${shlibs:Depends},
          ${misc:Depends}
 Enhances: beast2-mcmc
 Description: Bayesian MCMC phylogenetic inference - example data
- BEAST is a cross-platform program for Bayesian MCMC analysis of molecular 
- sequences. It is entirely orientated towards rooted, time-measured 
+ BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
+ sequences. It is entirely orientated towards rooted, time-measured
  phylogenies inferred using strict or relaxed molecular clock models. It
- can be used as a method of reconstructing phylogenies but is also a 
- framework for testing evolutionary hypotheses without conditioning on a 
- single tree topology. BEAST uses MCMC to average over tree space, so that 
- each tree is weighted proportional to its posterior probability. Included 
- is a simple to use user-interface program for setting up standard 
+ can be used as a method of reconstructing phylogenies but is also a
+ framework for testing evolutionary hypotheses without conditioning on a
+ single tree topology. BEAST uses MCMC to average over tree space, so that
+ each tree is weighted proportional to its posterior probability. Included
+ is a simple to use user-interface program for setting up standard
  analyses and a suit of programs for analysing the results.
  .
  This package contains the example data.
@@ -70,14 +70,14 @@ Depends: ${shlibs:Depends},
          ${misc:Depends}
 Enhances: beast2-mcmc
 Description: Bayesian MCMC phylogenetic inference - documentation
- BEAST is a cross-platform program for Bayesian MCMC analysis of molecular 
- sequences. It is entirely orientated towards rooted, time-measured 
+ BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
+ sequences. It is entirely orientated towards rooted, time-measured
  phylogenies inferred using strict or relaxed molecular clock models. It
- can be used as a method of reconstructing phylogenies but is also a 
- framework for testing evolutionary hypotheses without conditioning on a 
- single tree topology. BEAST uses MCMC to average over tree space, so that 
- each tree is weighted proportional to its posterior probability. Included 
- is a simple to use user-interface program for setting up standard 
+ can be used as a method of reconstructing phylogenies but is also a
+ framework for testing evolutionary hypotheses without conditioning on a
+ single tree topology. BEAST uses MCMC to average over tree space, so that
+ each tree is weighted proportional to its posterior probability. Included
+ is a simple to use user-interface program for setting up standard
  analyses and a suit of programs for analysing the results.
  .
  This package contains the documentation.


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: beast2
 Upstream-Contact: Alexei Drummond <alexei at cs.auckland.ac.nz>,
                   Andrew Rambaut <a.rambaut at ed.ac.uk>



View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/compare/694dc530e0aa4d4c9162348a5051501d8e385c98...333d65474cdce66230482a44c9bf6beff7a2b6e5

-- 
View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/compare/694dc530e0aa4d4c9162348a5051501d8e385c98...333d65474cdce66230482a44c9bf6beff7a2b6e5
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