[med-svn] [Git][med-team/ngopt-bins][master] 7 commits: New upstream version 0.0.20150522

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / ngopt-bins


Commits:
edb2640b by Andreas Tille at 2018-10-26T06:03:04Z
New upstream version 0.0.20150522
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04f46a96 by Andreas Tille at 2018-10-26T06:03:34Z
Update upstream source from tag 'upstream/0.0.20150522'

Update to upstream version '0.0.20150522'
with Debian dir 103deec8094d13a61ade9541a070f0f3406ab891
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83bface1 by Andreas Tille at 2018-10-26T06:19:16Z
New upstream version 0.0.20160825
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963c52f8 by Andreas Tille at 2018-10-26T06:19:39Z
Updated version 0.0.20160825 from 'upstream/0.0.20160825'

with Debian dir 103deec8094d13a61ade9541a070f0f3406ab891
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e0fec269 by Andreas Tille at 2018-10-26T06:22:02Z
New upstream release

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19eb9893 by Andreas Tille at 2018-10-26T06:53:35Z
The binary version of sga shipped with ngopt was segfaulting under certain conditions.  Thus sga is replaced by the Debian packaged version.

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0c5b7389 by Andreas Tille at 2018-10-26T09:13:53Z
Test script does not run if sga is deactivated

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14 changed files:

- + README.txt
- + adapter.fasta
- + bin/A5qc.jar
- + bin/GetInsertSize.jar
- + bin/SSPACE/SSPACE
- + bin/SSPACE/bin/ExtendOrFormatContigs.pl
- + bin/SSPACE/bin/PairingAndScaffolding.pl
- + bin/SSPACE/bin/mapWithBowtie.pl
- + bin/SSPACE/bin/readLibFiles.pl
- + bin/SSPACE/bowtie/bowtie
- + bin/SSPACE/bowtie/bowtie-build
- + bin/SSPACE/dotlib/DotLib.pm
- + bin/SSPACE/dotlib/getopts.pl
- + bin/SSPACE/dotlib/svn-commit.tmp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ngopt-bins/compare/8bd58c7b08452f6146f27f275c5ba159826d911a...0c5b73891e654b8311c34d32dd665781de6b984d

-- 
View it on GitLab: https://salsa.debian.org/med-team/ngopt-bins/compare/8bd58c7b08452f6146f27f275c5ba159826d911a...0c5b73891e654b8311c34d32dd665781de6b984d
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