[med-svn] [Git][med-team/lofreq][master] 10 commits: Refresh watch file

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / lofreq


Commits:
b475ca39 by Andreas Tille at 2018-10-29T07:56:37Z
Refresh watch file

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8769fc9e by Andreas Tille at 2018-10-29T07:57:06Z
New upstream version 2.1.3.1+dfsg
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85a9163b by Andreas Tille at 2018-10-29T07:57:06Z
Update upstream source from tag 'upstream/2.1.3.1+dfsg'

Update to upstream version '2.1.3.1+dfsg'
with Debian dir e16aa0ecf1f98ac4aa6d46831a663fc53fe84507
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4c652914 by Andreas Tille at 2018-10-29T07:57:06Z
New upstream version

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f29321c5 by Andreas Tille at 2018-10-29T07:57:07Z
debhelper 11

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330fafec by Andreas Tille at 2018-10-29T08:03:27Z
Point Vcs fields to salsa.debian.org

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fae61dc3 by Andreas Tille at 2018-10-29T08:03:27Z
Standards-Version: 4.2.1

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7e997e5d by Andreas Tille at 2018-10-29T08:03:28Z
Secure URI in copyright format

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247f1c13 by Andreas Tille at 2018-10-29T08:03:28Z
Remove trailing whitespace in debian/copyright

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3e3dfd7a by Andreas Tille at 2018-10-29T08:08:40Z
Cleanup changelog of not yet released package

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30 changed files:

- .gitignore
- + Changelog
- LICENSE
- README.md
- configure.ac
- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/rules
- debian/watch
- devel-doc/dist.README
- + snakemake/Snakefile
- + snakemake/cfg.yaml
- + snakemake/data/ref.fa
- + snakemake/data/regions.bed
- + snakemake/data/sample1_R1.fastq.gz
- + snakemake/data/sample1_R2.fastq.gz
- + snakemake/data/sample2.fastq.gz
- + snakemake/dryrun.sh
- + snakemake/ecoli-cfg.yaml
- src/lofreq/lofreq_call.c
- src/lofreq/lofreq_filter.c
- src/lofreq/lofreq_main.c
- src/lofreq/lofreq_uniq.c
- src/lofreq/plp.c
- src/lofreq/utils.c
- src/lofreq/vcf.c
- src/lofreq/vcf.h
- src/scripts/lofreq2_call_pparallel.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/lofreq/compare/6d9659ab3c552fb6db53e1b0f7f1b0077fd6e4e3...3e3dfd7aa431244b92f4eff008ecad36233ecab9

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View it on GitLab: https://salsa.debian.org/med-team/lofreq/compare/6d9659ab3c552fb6db53e1b0f7f1b0077fd6e4e3...3e3dfd7aa431244b92f4eff008ecad36233ecab9
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