[med-svn] [Git][med-team/lofreq][upstream] New upstream version 2.1.3.1+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / lofreq


Commits:
8769fc9e by Andreas Tille at 2018-10-29T07:57:06Z
New upstream version 2.1.3.1+dfsg
- - - - -


30 changed files:

- .gitignore
- + Changelog
- LICENSE
- README.md
- configure.ac
- devel-doc/dist.README
- + snakemake/Snakefile
- + snakemake/cfg.yaml
- + snakemake/data/ref.fa
- + snakemake/data/regions.bed
- + snakemake/data/sample1_R1.fastq.gz
- + snakemake/data/sample1_R2.fastq.gz
- + snakemake/data/sample2.fastq.gz
- + snakemake/dryrun.sh
- + snakemake/ecoli-cfg.yaml
- src/lofreq/lofreq_call.c
- src/lofreq/lofreq_filter.c
- src/lofreq/lofreq_main.c
- src/lofreq/lofreq_uniq.c
- src/lofreq/plp.c
- src/lofreq/utils.c
- src/lofreq/vcf.c
- src/lofreq/vcf.h
- src/scripts/lofreq2_call_pparallel.py
- src/scripts/lofreq2_somatic.py
- src/tools/Makefile.am
- src/tools/lofreq_star/fdr.py
- src/tools/lofreq_star/multiple_testing.py
- src/tools/lofreq_star/utils.py
- src/tools/phased_out/lofreq2_filter.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/lofreq/commit/8769fc9e7aeb20802b7fd91533d26a18c90a2a3d

-- 
View it on GitLab: https://salsa.debian.org/med-team/lofreq/commit/8769fc9e7aeb20802b7fd91533d26a18c90a2a3d
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20181029/fada8677/attachment-0001.html>