[med-svn] [Git][med-team/subread][master] 7 commits: New upstream version 1.6.3+dfsg

[Alexandre Mestiashvili]

Alexandre Mestiashvili pushed to branch master at Debian Med / subread


Commits:
edf71ef6 by Alexandre Mestiashvili at 2018-10-11T11:51:36Z
New upstream version 1.6.3+dfsg
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97a34acc by Alexandre Mestiashvili at 2018-10-11T11:52:34Z
Update upstream source from tag 'upstream/1.6.3+dfsg'

Update to upstream version '1.6.3+dfsg'
with Debian dir 95a826160a2bebb9f061d693448beecf9d759373
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930fbc8f by Alexandre Mestiashvili at 2018-10-11T12:01:49Z
DH_VERBOSE=1, check for nocheck in DEB_BUILD_OPTIONS

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e0126616 by Alexandre Mestiashvili at 2018-10-11T12:04:54Z
Bump Policy to 4.2.1

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069546a9 by Alexandre Mestiashvili at 2018-10-11T12:13:22Z
Refresh patches

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47f9bf9b by Alexandre Mestiashvili at 2018-10-11T12:33:39Z
New binary detectionCall, remove dropped by upstream coverageCount

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0d299f5c by Alexandre Mestiashvili at 2018-10-29T08:41:59Z
Update changelog

Gbp-Dch: Ignore

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29 changed files:

- debian/changelog
- debian/control
- debian/patches/arch_specific_flags.patch
- debian/patches/fix_ftbfs_kfreebsd.patch
- debian/patches/typo.patch
- debian/rules
- debian/subread.install
- doc/SubreadUsersGuide.tex
- src/HelperFunctions.c
- src/Makefile.FreeBSD
- src/Makefile.Linux
- src/Makefile.MacOS
- src/SNPCalling.c
- src/core-bigtable.c
- src/core-indel.c
- src/core-indel.h
- src/core-interface-aligner.c
- src/core-interface-subjunc.c
- src/core-junction.c
- src/core.c
- src/core.h
- src/coverage_calc.c
- src/gene-algorithms.c
- src/index-builder.c
- src/input-files.c
- src/input-files.h
- src/longread-one/LRMconfig.h
- src/longread-one/LRMfile-io.c
- src/longread-one/LRMsorted-hashtable.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/subread/compare/ac49c2927f1a8c6406d33821d3953ed8afa223a9...0d299f5cd5bfad9cfdc19903697569ab4c559d01

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View it on GitLab: https://salsa.debian.org/med-team/subread/compare/ac49c2927f1a8c6406d33821d3953ed8afa223a9...0d299f5cd5bfad9cfdc19903697569ab4c559d01
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