[med-svn] [Git][med-team/bcftools][master] 8 commits: New upstream version 1.9

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bcftools


Commits:
99b97632 by Andreas Tille at 2018-08-02T02:40:55Z
New upstream version 1.9
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a6654e1b by Andreas Tille at 2018-08-02T02:41:09Z
Update upstream source from tag 'upstream/1.9'

Update to upstream version '1.9'
with Debian dir 3c24f90ab91127f24977642af6d85e68be435626
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0dcd59ec by Andreas Tille at 2018-08-02T02:41:09Z
New upstream version

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fa16c9ff by Andreas Tille at 2018-08-02T02:47:59Z
Standards-Version: 4.1.5

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c1c69bb5 by Andreas Tille at 2018-08-02T02:49:14Z
Adapt patches

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881e4c8f by Andreas Tille at 2018-09-04T14:36:58Z
Standards-Version: 4.2.1

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994f0c76 by Andreas Tille at 2018-09-04T14:42:13Z
Fix Perl interpreter PATH

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3e9bdd4e by Andreas Tille at 2018-09-04T14:44:42Z
Upload to unstable

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30 changed files:

- INSTALL
- Makefile
- NEWS
- bam_sample.c
- bcftools.h
- bin.c
- configure.ac
- consensus.c
- convert.c
- csq.c
- debian/changelog
- debian/control
- debian/patches/skip_new_test_failing_on_32bit.patch
- debian/patches/tests-pluginpath.patch
- debian/rules
- doc/bcftools.1
- doc/bcftools.html
- doc/bcftools.txt
- filter.c
- + m4/hts_prog_cc_warnings.m4
- main.c
- mpileup.c
- plugins/check-sparsity.c
- plugins/color-chrs.c
- plugins/contrast.c
- plugins/dosage.c
- plugins/fill-tags.c
- plugins/fixref.c
- plugins/guess-ploidy.c
- plugins/isecGT.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bcftools/compare/0a2bc114f109326af34bdc5f548ebfeb1c08b3b3...3e9bdd4ed7547d01bd0e09f20bdffa501023eab0

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View it on GitLab: https://salsa.debian.org/med-team/bcftools/compare/0a2bc114f109326af34bdc5f548ebfeb1c08b3b3...3e9bdd4ed7547d01bd0e09f20bdffa501023eab0
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