[med-svn] [Git][med-team/sambamba][upstream] New upstream version 0.6.8-pre3

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / sambamba


Commits:
e731085a by Andreas Tille at 2018-09-23T05:42:56Z
New upstream version 0.6.8-pre3
- - - - -


30 changed files:

- .gitignore
- .gitmodules
- + .travis.yml
- + INSTALL.md
- Makefile
- Makefile.guix
- + Makefile.old
- README.md
- + RELEASE-NOTES.md
- cram/wrappers.d
- + doc/design.org
- + dub.json
- run_tests.sh
- main.d → sambamba/main.d
- sambamba/markdup.d
- + sambamba/markdup2.d
- sambamba/merge.d
- sambamba/pileup.d
- sambamba/sort.d
- + sambamba/subsample.d
- + sambamba/validate.d
- sambamba/view.d
- bioconda_push.sh → scripts/bioconda_push.sh
- bioconda_yaml_gen.py → scripts/bioconda_yaml_gen.py
- .drone.yml.template → scripts/drone.yml.template
- .dropbox.sh → scripts/dropbox.sh
- randomize_bases.d → scripts/randomize_bases.d
- + test/benchmark/stats.org
- + test/ex1_header.sam
- + test/regression/issue_331_header.json


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/sambamba/commit/e731085a7c9bb45f70637b38597266d0f1e14d81

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