[med-svn] [Git][med-team/abyss][master] 7 commits: New upstream version 2.1.1

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / abyss


Commits:
bd7747be by Andreas Tille at 2018-09-26T11:14:40Z
New upstream version 2.1.1
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6f73bf59 by Andreas Tille at 2018-09-26T11:14:44Z
Update upstream source from tag 'upstream/2.1.1'

Update to upstream version '2.1.1'
with Debian dir 5168c125b02e1dd13bfb89ef808a0a7491a3827e
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78741e62 by Andreas Tille at 2018-09-26T11:14:44Z
New upstream version

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0d61b17a by Andreas Tille at 2018-09-26T11:14:48Z
Standards-Version: 4.2.1

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f2d36ffe by Andreas Tille at 2018-09-26T11:16:03Z
Adapt quilt patch

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8b745aba by Andreas Tille at 2018-09-26T11:30:12Z
Fix Perl interpreter path

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f38d9973 by Andreas Tille at 2018-09-26T11:43:03Z
Upload to unstable

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30 changed files:

- .circleci/config.yml
- + .github/ISSUE_TEMPLATE.rb
- ABYSS/abyss.cc
- Assembly/BranchGroup.h
- Assembly/BranchRecordBase.h
- Assembly/CoverageAlgorithm.h
- Assembly/Options.cc
- Assembly/Options.h
- Bloom/BloomFilter.h
- Bloom/BloomFilterWindow.h
- Bloom/CascadingBloomFilter.h
- Bloom/bloom.cc
- BloomDBG/HashAgnosticCascadingBloom.h
- BloomDBG/LightweightKmer.h
- BloomDBG/Makefile.am
- BloomDBG/RollingBloomDBG.h
- BloomDBG/RollingHash.h
- BloomDBG/bloom-dbg.cc
- BloomDBG/bloom-dbg.h
- ChangeLog
- Common/Estimate.h
- + Common/Exception.h
- Common/Histogram.h
- Common/Makefile.am
- Common/PMF.h
- Common/SAM.h
- DataLayer/FastaReader.h
- DataLayer/fac.cc
- DistanceEst/DistanceEst.cpp
- Graph/GfaIO.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/abyss/compare/e024ef801ba2eb77c9412e3da7a2e533672d0f37...f38d9973a158a7c68e39627fec91c903273e018d

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View it on GitLab: https://salsa.debian.org/med-team/abyss/compare/e024ef801ba2eb77c9412e3da7a2e533672d0f37...f38d9973a158a7c68e39627fec91c903273e018d
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