[med-svn] [Git][med-team/python-treetime][upstream] New upstream version 0.4.0

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / python-treetime


Commits:
045c51f7 by Andreas Tille at 2018-06-29T14:43:02Z
New upstream version 0.4.0
- - - - -


30 changed files:

- .travis.yml
- .travis_test.sh
- README.md
- bin/ancestral_reconstruction.py
- bin/homoplasy_scanner.py
- bin/mugration.py
- bin/temporal_signal.py
- bin/timetree_inference.py
- data/ebola.nwk
- examples/ancestral_inference.py
- examples/basic_clock_tree_diagnostics.py
- examples/ebola.py
- examples/rerooting_and_timetrees.py
- − requirements.txt
- setup.py
- + test/command_line_tests.sh
- test/test_treetime.py
- treetime/__init__.py
- treetime/aa_models.py
- treetime/branch_len_interpolator.py
- treetime/clock_tree.py
- treetime/config.py
- treetime/distribution.py
- treetime/gtr.py
- treetime/merger_models.py
- treetime/node_interpolator.py
- treetime/nuc_models.py
- treetime/seq_utils.py
- treetime/treeanc.py
- treetime/treetime.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-treetime/commit/045c51f7554c3b99e2fe07b78f97c9851b2b6be9

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