[med-svn] [Git][med-team/bagpipe][master] 7 commits: debhelper 12

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bagpipe


Commits:
fc66f9af by Andreas Tille at 2019-04-08T07:24:30Z
debhelper 12

- - - - -
28cad729 by Andreas Tille at 2019-04-08T07:24:38Z
Point Vcs fields to salsa.debian.org

- - - - -
b11c531e by Andreas Tille at 2019-04-08T07:24:38Z
Standards-Version: 4.3.0

- - - - -
21c07f5b by Andreas Tille at 2019-04-08T07:24:39Z
Drop useless get-orig-source target

- - - - -
853931c4 by Andreas Tille at 2019-04-08T07:24:39Z
Remove trailing whitespace in debian/control

- - - - -
a7e5bf61 by Andreas Tille at 2019-04-08T07:25:26Z
Upload to unstable

- - - - -
7ff5ff5b by Andreas Tille at 2019-04-08T07:27:33Z
Remove autogenarated changes

- - - - -


4 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,9 +1,5 @@
 bagpipe (2012.02.15-1) UNRELEASED; urgency=low
 
-  [ Thorsten Alteholz ]
   * initial version (Closes: #XXXXXX)
 
-  [ Andreas Tille ]
-  * Moved packaging from SVN to Git
-
- -- Thorsten Alteholz <debian at alteholz.de>  Tue, 09 Apr 2013 18:00:07 +0200
+ -- Thorsten Alteholz <debian at alteholz.de>  Mon, 08 Apr 2019 09:24:39 +0200


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-10
+12


=====================================
debian/control
=====================================
@@ -3,10 +3,10 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Thorsten Alteholz <debian at alteholz.de>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 10)
-Standards-Version: 3.9.8
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/bagpipe.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/bagpipe.git
+Build-Depends: debhelper (>= 12~)
+Standards-Version: 4.3.0
+Vcs-Browser: https://salsa.debian.org/med-team/bagpipe
+Vcs-Git: https://salsa.debian.org/med-team/bagpipe.git
 Homepage: http://valdarlab.unc.edu/software/bagpipe/_build/html/bagpipe.html
 
 Package: bagpipe
@@ -16,24 +16,24 @@ Depends: ${shlibs:Depends},
          ${perl:Depends},
          r-other-valdar-bagpipe.backend
 Description: genomewide LD mapping
- Bagpipe is a program for performing genomewide linkage disequilibrium 
- mapping of quantitative trait loci in populations whose genome structure 
- can be accommodated in the HAPPY framework [Mott00]. This includes most 
+ Bagpipe is a program for performing genomewide linkage disequilibrium
+ mapping of quantitative trait loci in populations whose genome structure
+ can be accommodated in the HAPPY framework [Mott00]. This includes most
  diploid crosses where the founders of the individuals have known genotypes.
  .
-  * Bagpipe is a simplified and streamlined version of Bagphenotype that 
+  * Bagpipe is a simplified and streamlined version of Bagphenotype that
     does not currently include resample model averaging (RMA) capabilities.
-  * Bagpipe can help fit single locus regression models (with or without 
-    random effects) to marker intervals whose genetic ancestry is inferred 
+  * Bagpipe can help fit single locus regression models (with or without
+    random effects) to marker intervals whose genetic ancestry is inferred
     using the HAPPY software.
   * Bagpipe cannot help you decide what is a sensible model to fit.
-  * Bagpipe does not currently accommodate populations with significant 
-    population structure, except through the specification of simple random 
+  * Bagpipe does not currently accommodate populations with significant
+    population structure, except through the specification of simple random
     intercepts based on unpatterned covariance matrices.
-  * Bagpipe is named after the Scottish wind instrument "the bagpipes" and 
-    after Bagphenotype, which in turn was a PIPEline for BAGging-based 
-    multiple QTL analysis of phenoTYPEs. Bagphenotype was in turn based 
-    on software written by Richard Mott and William Valdar to analyze 
+  * Bagpipe is named after the Scottish wind instrument "the bagpipes" and
+    after Bagphenotype, which in turn was a PIPEline for BAGging-based
+    multiple QTL analysis of phenoTYPEs. Bagphenotype was in turn based
+    on software written by Richard Mott and William Valdar to analyze
     heterogeneous stock mice in [Valdar06].
-  * Bagpipe is experimental software, is provided free of charge subject to 
+  * Bagpipe is experimental software, is provided free of charge subject to
     copyleft restrictions, and comes with no guarantees whatsoever.


=====================================
debian/rules
=====================================
@@ -10,7 +10,4 @@ override_dh_auto_install:
 	ls -lR
 #	dh_installchangelogs README
 
-get-orig-source:
-	mkdir -p ../tarballs
-	uscan --verbose --force-download --destdir=../tarballs
 



View it on GitLab: https://salsa.debian.org/med-team/bagpipe/compare/fb9ed64b21ef41dcdfeb9b26def24627771a28e4...7ff5ff5bd3488bfb7e81e0bf960de6328181bce4

-- 
View it on GitLab: https://salsa.debian.org/med-team/bagpipe/compare/fb9ed64b21ef41dcdfeb9b26def24627771a28e4...7ff5ff5bd3488bfb7e81e0bf960de6328181bce4
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