April 2019 Archives by date

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Starting: Mon Apr 1 18:03:58 BST 2019
Ending: Tue Apr 30 16:25:46 BST 2019
Messages: 196

• [med-svn] [Git][med-team/conda][master] 5 commits: Ignore some more tests   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus][master] 4 commits: Ignore one more H5pyDeprecationWarning   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus][master] 2 commits: Document why non-zero result is ignored   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus] Pushed new tag debian/2.3.2-2   Andreas Tille
• [med-svn] [Git][med-team/pilercr][master] Changing my e-mail address.   Andrius Merkys
• [med-svn] [Git][med-team/bismark][master] Add registries   Dylan Aïssi
• [med-svn] [Git][med-team/pbgenomicconsensus][master] 6 commits: Mark autopkgtest that is forced to succeed "superficial"   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus] Pushed new tag debian/2.3.2-3   Andreas Tille
• [med-svn] [Git][med-team/ciftilib][debian/master] 3 commits: gbp.conf: drop pq settings   Ghislain Antony Vaillant
• [med-svn] [Git][med-team/conda][master] 2 commits: Add missing import   Andreas Tille
• [med-svn] [Git][med-team/bbmap][master] 5 commits: Do not use Debian Med dir but rather usr/share/bbmap   Andreas Tille
• [med-svn] [Git][med-team/bbmap][manpages] Add new manpages and move all manpages into debian/mans subdir   Andreas Tille
• [med-svn] [Git][med-team/conda][master] 7 commits: Other random fixes in test suite   Andreas Tille
• [med-svn] [Git][med-team/conda][pristine-tar] pristine-tar data for conda_4.6.10+dfsg.orig.tar.xz   Andreas Tille
• [med-svn] [Git][med-team/conda] Pushed new tag upstream/4.6.10+dfsg   Andreas Tille
• [med-svn] [Git][med-team/conda][upstream] New upstream version 4.6.10+dfsg   Andreas Tille
• [med-svn] [Git][med-team/python-fhirclient] Pushed new tag debian/3.0.0-1   Andreas Tille
• [med-svn] [Git][med-team/python-fhirclient][master] 9 commits: debhelper 12   Andreas Tille
• [med-svn] [Git][med-team/conda][master] Adapting patches to new upstream version   Andreas Tille
• [med-svn] [Git][med-team/conda][master] 2 commits: Ignore test trying to verify installation of Windows executable files   Andreas Tille
• [med-svn] [Git][med-team/conda][master] 3 commits: Fix cleaning after build time tests   Andreas Tille
• [med-svn] [Git][med-team/camitk][master] 3 commits: Apply patch by Andreas Beckmann <anbe at debian.org>   Andreas Tille
• [med-svn] [Git][med-team/camitk] Pushed new tag debian/4.1.2-3   Andreas Tille
• [med-svn] [Git][med-team/conda][master] Exclude test that tries to switch from different environments and fails at...   Andreas Tille
• [med-svn] [Git][med-team/bbmap][master] Ad manpage for bbduk.sh   Andreas Tille
• [med-svn] [Git][med-team/bbmap][master] Add manpage for dedupe.sh   Andreas Tille
• [med-svn] [Git][med-team/bbmap][master] Add manpage for reformat.sh   Andreas Tille
• [med-svn] [Git][med-team/bwa] Pushed new branch debian-stretch   Dylan Aïssi
• [med-svn] [Git][med-team/bwa][debian-stretch] Add trailing newline to d/patches/series   Dylan Aïssi
• [med-svn] [Git][med-team/pbgenomicconsensus] Pushed new tag debian/2.3.2-4   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus][master] 3 commits: Fix dependencies   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus][master] Add autopkgtest dependencies   Liubov Chuprikova
• [med-svn] [Git][med-team/pbgenomicconsensus][master] Upload to unstable   Andreas Tille
• [med-svn] [Git][med-team/pbgenomicconsensus] Pushed new tag debian/2.3.2-5   Andreas Tille
• [med-svn] [Git][med-team/genometester][master] Avoid issues in parsing authors names   Andreas Tille
• [med-svn] [Git][med-team/axparafit][master] 7 commits: Add fake watch file   Andreas Tille
• [med-svn] [Git][med-team/axpcoords][master] 7 commits: Add fake watch file   Andreas Tille
• [med-svn] [Git][med-team/bagpipe] Pushed new tag debian/2012.02.15-1   Andreas Tille
• [med-svn] [Git][med-team/bagpipe][master] 7 commits: debhelper 12   Andreas Tille
• [med-svn] [Git][med-team/barrnap-data-nonfree][pristine-tar] pristine-tar data for barrnap-data-nonfree_0.9.orig.tar.gz   Andreas Tille
• [med-svn] [Git][med-team/barrnap-data-nonfree] Pushed new tag upstream/0.9   Andreas Tille
• [med-svn] [Git][med-team/barrnap-data-nonfree][master] 10 commits: New upstream version 0.9   Andreas Tille
• [med-svn] [Git][med-team/barrnap-data-nonfree][upstream] New upstream version 0.9   Andreas Tille
• [med-svn] [Git][med-team/bigsdb][master] 4 commits: debhelper 12   Andreas Tille
• [med-svn] [Git][med-team/bio-formats][master] 10 commits: Use Files-Excluded   Andreas Tille
• [med-svn] [Git][med-team/bio-formats][pristine-tar] pristine-tar data for bio-formats_6.0.1+dfsg.orig.tar.xz   Andreas Tille
• [med-svn] [Git][med-team/bio-formats] Pushed new tag upstream/6.0.1+dfsg   Andreas Tille
• [med-svn] [Git][med-team/bio-formats][upstream] New upstream version 6.0.1+dfsg   Andreas Tille
• [med-svn] [Git][med-team/blat][master] 7 commits: debhelper 12   Andreas Tille
• [med-svn] Hyder electric reach forklift [HTF15, HTF20,HTF25] Sherry Wu   Sherry Wu
• [med-svn] [Git][med-team/bcbio][master] Updated control, TODO   Steffen Möller
• [med-svn] [Git][med-team/abacas][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/aegean][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/ampliconnoise][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/andi][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/anfo][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/aragorn][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/arden][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/artemis][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/barrnap][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/bowtie][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/dindel][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/clustalo][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/codonw][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/fastaq][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/fastqc][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/fastx-toolkit][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/freecontact][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/indelible][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/kissplice][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/kmc][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/ltrsift][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/miniasm][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/minimap][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/mothur][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/mummer][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/muscle][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/pbsim][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/picard-tools][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/qiime][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/rna-star][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/snp-sites][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/snpomatic][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/sra-sdk][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/ssake][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/tantan][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/trimmomatic][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/uc-echo][master] Fix edam syntax input+output is singular   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Update TODO   Andreas Tille
• [med-svn] [Git][med-team/igraph] Pushed new branch debian/stretch   Dylan Aïssi
• [med-svn] [Git][med-team/bcbio][master] Rudimentary packaging of biobambam2   Andreas Tille
• [med-svn] [Git][med-team/biobambam2][master] Initial packaging   Andreas Tille
• [med-svn] [Git][med-team/biobambam2][master] Publication data   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Rudimentary packaging for atropos   Andreas Tille
• [med-svn] [Git][med-team/atropos][master] Add citation   Andreas Tille
• [med-svn] [Git][med-team/atropos][master] Fix runtime test, drop autopkgtest template, fix installation   Andreas Tille
• [med-svn] [Git][med-team/atropos][master] 3 commits: Fix installation   Andreas Tille
• [med-svn] [Git][med-team/libmaus2][master] 3 commits: Use d-shlibs   Andreas Tille
• [med-svn] [Git][med-team/atropos][master] 2 commits: Add manpage   Andreas Tille
• [med-svn] [Git][med-team/libmaus2][master] 2 commits: Depends: zlib1g-dev   Andreas Tille
• [med-svn] [Git][med-team/biobambam2][master] Cleanup packaging   Andreas Tille
• [med-svn] [Git][med-team/libmaus2][master] 5 commits: d/copyright   Andreas Tille
• [med-svn] [Git][med-team/libmaus2][master] Upload to unstable   Andreas Tille
• [med-svn] [Git][med-team/biobambam2][master] 3 commits: d/copyright   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Update TODO   Andreas Tille
• [med-svn] [Git][med-team/umis][master] 6 commits: d/copyright   Andreas Tille
• [med-svn] [Git][med-team/umis][master] 3 commits: Try to force installation of the umis files   Andreas Tille
• [med-svn] [Git][med-team/umis][master] 3 commits: Add manpage   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Update TODO   Andreas Tille
• [med-svn] [Git][med-team/mosdepth][master] Add citation   Andreas Tille
• [med-svn] [Git][med-team/mosdepth][master] several nim libraries would be needed - giving up here   Andreas Tille
• [med-svn] [Git][med-team/optitype][master] Add citation   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] 2 commits: Update TODO   Andreas Tille
• [med-svn] [Git][med-team/snap][master] d/control: Update homepage (Closes: #927011)   Dylan Aïssi
• [med-svn] [Git][med-team/bcbio][pristine-tar] pristine-tar data for bcbio_1.1.4.orig.tar.gz   Steffen Möller
• [med-svn] [Git][med-team/bcbio][upstream] New upstream version 1.1.4   Steffen Möller
• [med-svn] [Git][med-team/bcbio][master] 4 commits: New upstream version 1.1.4   Steffen Möller
• [med-svn] [Git][med-team/vcftools] Pushed new branch debian/stretch   Dylan Aïssi
• [med-svn] [Git][med-team/bwa] Pushed new tag debian/0.7.15-2+deb9u1   Dylan Aïssi
• [med-svn] [Git][med-team/igraph] Pushed new tag debian/0.7.1-2.1+deb9u1   Dylan Aïssi
• [med-svn] [Git][med-team/vcftools] Pushed new tag debian/0.1.14+dfsg-4+deb9u1   Dylan Aïssi
• [med-svn] [Git][med-team/pilercr] Pushed new tag debian/1.06+dfsg-1   Andreas Tille
• [med-svn] [Git][med-team/libbiod][master] Rebuild to bump dependencies to libphobos2-ldc-shared82   Andreas Tille
• [med-svn] [Git][med-team/libbiod][master] Fix broken new changelog entry   Andreas Tille
• [med-svn] [Git][med-team/rockhopper][master] Sort out some external Java classes - more to come   Andreas Tille
• [med-svn] [Git][med-team/rockhopper] Deleted tag upstream/2.0.3+dfsg   Andreas Tille
• [med-svn] [Git][med-team/rockhopper][master] 6 commits: debhelper 12   Andreas Tille
• [med-svn] [Git][med-team/rockhopper][pristine-tar] pristine-tar data for rockhopper_2.0.3+dfsg.orig.tar.xz   Andreas Tille
• [med-svn] [Git][med-team/rockhopper] Pushed new tag upstream/2.0.3+dfsg   Andreas Tille
• [med-svn] [Git][med-team/rockhopper][upstream] New upstream version 2.0.3+dfsg   Andreas Tille
• [med-svn] [Git][med-team/pilercr][master] 6 commits: Adding a patch to fix hurd and kfreebsd-* builds.   Andrius Merkys
• [med-svn] [Git][med-team/bali-phy][master] Switch to nlohmann-json3   Andreas Tille
• [med-svn] [Git][med-team/bali-phy] Pushed new tag debian/3.4.1+dfsg-1exp1   Andreas Tille
• [med-svn] [Git][med-team/pbcopper][master] 4 commits: Skip test relying on clock setting   Andreas Tille
• [med-svn] [Git][med-team/pbcopper] Pushed new tag debian/0.4.1+dfsg-3   Andreas Tille
• [med-svn] [Git][med-team/tree-puzzle][master] 2 commits: Adds the autopackagetest (Bug #909717)   Andreas Tille
• [med-svn] [Git][med-team/tree-puzzle][master] 2 commits: Remove redundant dependency relations   Andreas Tille
• [med-svn] [Git][med-team/epcr][master] 4 commits: autopkgtest folder   Andreas Tille
• [med-svn] [Git][med-team/epcr][master] Remove not helpful autopkgtest.sh in wrong place   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Rudimentary packaging for vcfanno pushed to Salsa   Andreas Tille
• [med-svn] [Git][med-team/vcfanno][master] Start with some go stuff (any help is welcome - I've never touched go before)   Andreas Tille
• [med-svn] [Git][med-team/pilercr] Pushed new tag debian/1.06+dfsg-2   Andrius Merkys
• [med-svn] [Git][med-team/atropos][master] Added References to Registries.   Steffen Möller
• [med-svn] [Git][med-team/vcfanno][master] Build-Depends: golang-github-burntsushi-toml-dev   Andreas Tille
• [med-svn] [Git][med-team/vcfanno][master] Take over changes from: dh-make-golang make -type program -git_revision=v0.3.1...   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] 2 commits: Added Lumpy and Manta to TODO list for bcbio   Steffen Möller
• [med-svn] [Git][med-team/biobambam2][master] Added registry references   Steffen Möller
• [med-svn] [Git][med-team/hisat2][master] Extending support for Python files of hisat2   Steffen Möller
• [med-svn] [Git][med-team/bcbio][master] build tests bring more dependencies   Steffen Möller
• [med-svn] [Git][med-team/bcbio][master] Qalimap packaging is in Git but some code depencency lost   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Initial packaging skeleton at https://salsa.debian.org/med-team/gffread   Andreas Tille
• [med-svn] [Git][med-team/gffread][master] gclib injected into salsa   Andreas Tille
• [med-svn] [Git][med-team/gclib][master] 2 commits: Enhance description   Andreas Tille
• [med-svn] Doublette Re: [Git][med-team/gffread][master] gclib injected into salsa   Steffen Möller
• [med-svn] [Git][med-team/bcbio][master] Updates to bcbio's TODO list   Steffen Möller
• [med-svn] [Git][med-team/invesalius][master] 3 commits: Force Python3 >= 3.7 (its also python3-dev rather than python3-all-dev)   Andreas Tille
• [med-svn] [Git][med-team/invesalius] Pushed new tag debian/3.1.99992-3   Andreas Tille
• [med-svn] [Git][med-team/htslib][master] 2 commits: Stop building on any-i386   Andreas Tille
• [med-svn] [Git][med-team/htslib] Pushed new tag debian/1.9-11   Andreas Tille
• [med-svn] [Debian Wiki] Update of "DebianMed/SoftwareLiberation" by AndreasTille   Debian Wiki
• [med-svn] [Debian Wiki] Update of "DebianMed/SoftwareLiberation" by AndreasTille   Debian Wiki
• [med-svn] [Git][med-team/manta][master] 7 commits: New upstream version 1.5.0+dfsg   Andreas Tille
• [med-svn] [Git][med-team/manta][pristine-tar] pristine-tar data for manta_1.5.0+dfsg.orig.tar.xz   Andreas Tille
• [med-svn] [Git][med-team/manta] Pushed new tag upstream/1.5.0+dfsg   Andreas Tille
• [med-svn] [Git][med-team/manta][upstream] New upstream version 1.5.0+dfsg   Andreas Tille
• [med-svn] [Git][med-team/manta][master] Opened issue to port to Python3   Andreas Tille
• [med-svn] [Git][med-team/metaphlan2] Pushed new branch ubuntu/bionic   Dylan Aïssi
• [med-svn] [Git][med-team/gatk][master] New upstream release   Andreas Tille
• [med-svn] [Git][med-team/insighttoolkit][master] Update rules file, use DEB_HOST_ARCH instead of DEB_BUILD_ARCH   Gianfranco Costamagna
• [med-svn] [Git][med-team/insighttoolkit][master] Update rules, dump log file when the testsuite fails   Gianfranco Costamagna
• [med-svn] [Git][med-team/insighttoolkit][master] Update changelog, with part of Ubuntu changes   Gianfranco Costamagna
• [med-svn] [Git][med-team/cwltool][master] Homepage: use HTTPS   Michael R. Crusoe
• [med-svn] [Git][med-team/bcbio][master] r-other-wasabi and oncufuse injected into Salsa (both not finished)   Andreas Tille
• [med-svn] [Git][med-team/bcbio][master] Beginn of packaging is in Salsa   Andreas Tille
• [med-svn] [Git][med-team/castxml][master] 5 commits: correct watch file   Gert Wollny
• [med-svn] [Git][med-team/castxml][pristine-tar] pristine-tar data for castxml_0.2.0.orig.tar.gz   Gert Wollny
• [med-svn] [Git][med-team/castxml][upstream] New upstream version 0.2.0   Gert Wollny
• [med-svn] [Git][med-team/castxml] Pushed new tag upstream/0.2.0   Gert Wollny
• [med-svn] [Git][med-team/castxml][master] Prepare upload to experimental   Gert Wollny
• [med-svn] [Git][med-team/castxml] Pushed new tag debian/0.2.0-1   Gert Wollny
• [med-svn] [Git][med-team/insighttoolkit][upstream] New upstream version 4.13.2-dfsg1   Gert Wollny
• [med-svn] [Git][med-team/insighttoolkit][master] 6 commits: d/rules: update version   Gert Wollny
• [med-svn] [Git][med-team/insighttoolkit] Pushed new tag debian/4.13.2-dfsg1-1_exp   Gert Wollny
• [med-svn] [Git][med-team/insighttoolkit] Pushed new tag upstream/4.13.2-dfsg1   Gert Wollny
• [med-svn] [Git][med-team/gdcm][master] 5 commits: New upstream version 2.8.8   Gert Wollny
• [med-svn] [Git][med-team/gdcm][pristine-tar] pristine-tar data for gdcm_2.8.9.orig.tar.bz2   Gert Wollny
• [med-svn] [Git][med-team/gdcm][upstream] New upstream version 2.8.9   Gert Wollny
• [med-svn] [Git][med-team/gdcm] Pushed new tag upstream/2.8.9   Gert Wollny
• [med-svn] [Git][med-team/subread][master] 9 commits: Update d/watch, add uversionmangle to remove -source suffix   Alexandre Mestiashvili
• [med-svn] [Git][med-team/subread][pristine-tar] pristine-tar data for subread_1.6.4+dfsg.orig.tar.xz   Alexandre Mestiashvili
• [med-svn] [Git][med-team/subread][upstream] New upstream version 1.6.4+dfsg   Alexandre Mestiashvili
• [med-svn] [Git][med-team/subread] Pushed new tag upstream/1.6.4+dfsg   Alexandre Mestiashvili
• [med-svn] [Git][med-team/kma][master] Updated d/u/metadata   Steffen Möller
• [med-svn] [Git][med-team/trace2dbest][master] Updated OMICtools ref in metadata   Steffen Möller
• [med-svn] [Git][med-team/gdcm][master] Upload to experimental   Gert Wollny
• [med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.9-1_exp1   Gert Wollny

Last message date: Tue Apr 30 16:25:46 BST 2019
Archived on: Tue Apr 30 16:25:49 BST 2019

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