[med-svn] [Git][med-team/blat][master] 7 commits: debhelper 12

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / blat


Commits:
df9eb27e by Andreas Tille at 2019-04-08T09:31:11Z
debhelper 12

- - - - -
4882e612 by Andreas Tille at 2019-04-08T09:34:47Z
Point Vcs fields to salsa.debian.org

- - - - -
bf18a892 by Andreas Tille at 2019-04-08T09:34:47Z
Standards-Version: 4.3.0

- - - - -
f6c59f37 by Andreas Tille at 2019-04-08T09:34:48Z
Secure URI in copyright format

- - - - -
1a96963b by Andreas Tille at 2019-04-08T09:35:04Z
Respect DEB_BUILD_OPTIONS in override_dh_auto_test target

- - - - -
cb307b7c by Andreas Tille at 2019-04-08T09:36:24Z
Do not parse d/changelog

- - - - -
8d32bf58 by Andreas Tille at 2019-04-08T09:39:44Z
Remove autogenerated changes

- - - - -


5 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,5 +1,5 @@
-blat (35-1) unstable; urgency=low
+blat (35-1) UNRELEASED; urgency=low
 
   * Initial release (Closes: #740601)
 
- -- Andreas Tille <tille at debian.org>  Wed, 26 Feb 2014 13:52:17 +0100
+ -- Andreas Tille <tille at debian.org>  Mon, 08 Apr 2019 11:36:24 +0200


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-9
+12


=====================================
debian/control
=====================================
@@ -1,18 +1,20 @@
 Source: blat
-Section: non-free/science
-Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 9),
-               libpng12-dev | libpng-dev
-Standards-Version: 3.9.5
-Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/blat.git
-Vcs-Git: git://anonscm.debian.org/debian-med/blat.git
+Section: non-free/science
+XS-Autobuild: no
+Priority: optional
+Build-Depends: debhelper (>= 12~),
+               libpng-dev
+Standards-Version: 4.3.0
+Vcs-Browser: https://salsa.debian.org/med-team/blat
+Vcs-Git: https://salsa.debian.org/med-team/blat.git
 Homepage: http://genome.ucsc.edu/cgi-bin/hgBlat
 
 Package: blat
 Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
+Depends: ${shlibs:Depends},
+         ${misc:Depends}
 Description: BLAST-Like Alignment Tool
  BLAT on DNA is designed to quickly find sequences of 95% and greater
  similarity of length 25 bases or more. It may miss more divergent or shorter
@@ -29,4 +31,3 @@ Description: BLAST-Like Alignment Tool
  of probable homology, which are then loaded into memory for a detailed
  alignment. Protein BLAT works in a similar manner, except with 4-mers rather
  than 11-mers. The protein index takes a little more than 2 gigabytes.
-


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: BLAT
 Upstream-Contact: Jim Kent <jim_kent at pacbell.net>
 Source: http://users.soe.ucsc.edu/~kent/src/


=====================================
debian/rules
=====================================
@@ -2,7 +2,7 @@
 
 DH_VERBOSE := 1
 
-DEBPKGNAME     := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
+include /usr/share/dpkg/default.mk
 
 # alternatively to manually set those variables you can
 #  include /usr/share/cdbs/1/rules/buildvars.mk
@@ -10,7 +10,7 @@ DEBPKGNAME     := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
 # a similar manner are welcome.
 
 MACHTYPE := $(shell dpkg-architecture -qDEB_HOST_GNU_CPU)
-DESTDIR  := $(CURDIR)/debian/$(DEBPKGNAME)/usr/
+DESTDIR  := $(CURDIR)/debian/$(DEB_SOURCE)/usr/
 
 # When using -O2 optimisation the BLAT test (cd blat/test; make) will fail
 CFLAGS:=$(shell dpkg-buildflags --get CFLAGS | sed 's/-O2/-O1/')
@@ -46,5 +46,7 @@ override_dh_auto_install:
 	PATH=$(DESTDIR)/bin:$${PATH} make test
 
 override_dh_auto_test:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	echo "Test suite is running after dh_auto_install"
 	echo "Probably it would be better to create a proper install target"
+endif



View it on GitLab: https://salsa.debian.org/med-team/blat/compare/06fd6949dff5768a4e3a7a8c1b32e656df36d1f5...8d32bf58404029ad30e9c62391daede5984ba883

-- 
View it on GitLab: https://salsa.debian.org/med-team/blat/compare/06fd6949dff5768a4e3a7a8c1b32e656df36d1f5...8d32bf58404029ad30e9c62391daede5984ba883
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