[med-svn] [Git][med-team/last-align][master] 13 commits: New upstream version

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / last-align


Commits:
985cd10f by Steffen Moeller at 2019-10-26T15:57:50Z
New upstream version

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901bee69 by Steffen Moeller at 2019-10-26T15:57:51Z
New upstream version 992
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fea9790f by Steffen Moeller at 2019-10-26T15:57:52Z
Update upstream source from tag 'upstream/992'

Update to upstream version '992'
with Debian dir 5d0fc88148bc29fe1f0d81bcb4e4b47d13877bd9
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634e8591 by Steffen Moeller at 2019-12-04T09:33:40Z
Leftover changes

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8cf290a8 by Steffen Moeller at 2019-12-04T09:34:58Z
Patching Makefile

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80b78351 by Steffen Moeller at 2019-12-04T09:36:07Z
Merge branch 'master' of https://salsa.debian.org/med-team/last-align

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47c94900 by Steffen Moeller at 2019-12-04T09:38:02Z
build error - new upstream avail, no fix

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536648e6 by Steffen Moeller at 2019-12-04T09:38:26Z
New upstream version 1021
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1ed13953 by Steffen Moeller at 2019-12-04T09:38:26Z
New upstream version

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7c773123 by Steffen Moeller at 2019-12-04T09:38:27Z
Update upstream source from tag 'upstream/1021'

Update to upstream version '1021'
with Debian dir f02d2a783a2f31340858d5a462f01e72b1134d65
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eed5b95d by Steffen Moeller at 2019-12-04T09:44:13Z
Added new ref

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59fcb2ca by Steffen Moeller at 2019-12-04T09:51:43Z
New upstream version

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3d57431d by Steffen Moeller at 2019-12-04T10:11:40Z
fixed path in last-train - ready to upload

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30 changed files:

- ChangeLog.txt
- + build/gc-inc.sh
- data/BL80.mat
- + data/PAM10.mat
- data/PAM30.mat
- + data/gc.prt
- debian/changelog
- debian/patches/2to3.patch
- + debian/patches/helpMakefiles.patch
- debian/patches/series
- debian/upstream/metadata
- doc/last-evalues.html
- doc/last-evalues.txt
- doc/last-matrices.html
- doc/last-matrices.txt
- doc/last-train.html
- doc/last-train.txt
- doc/lastal.html
- doc/lastal.txt
- examples/multiMito.maf
- makefile
- scripts/last-train
- src/Alignment.cc
- src/Centroid.cc
- src/Centroid.hh
- src/CyclicSubsetSeed.hh
- src/GappedXdropAligner.cc
- src/GappedXdropAligner.hh
- src/GappedXdropAligner2qual.cc
- src/GappedXdropAligner3frame.cc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/last-align/compare/ddbe0d729e2a28be6fb581eb33147fd0345f93a5...3d57431d536b097d0761358c89a477e1f1ccf56d

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View it on GitLab: https://salsa.debian.org/med-team/last-align/compare/ddbe0d729e2a28be6fb581eb33147fd0345f93a5...3d57431d536b097d0761358c89a477e1f1ccf56d
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