[med-svn] [Git][med-team/diamond-aligner][master] 4 commits: New upstream version 0.9.29+dfsg

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / diamond-aligner


Commits:
2809b67e by Steffen Moeller at 2019-12-04T23:17:24Z
New upstream version 0.9.29+dfsg
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86e0c8ec by Steffen Moeller at 2019-12-04T23:17:24Z
New upstream version

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96a49a96 by Steffen Moeller at 2019-12-04T23:17:25Z
Update upstream source from tag 'upstream/0.9.29+dfsg'

Update to upstream version '0.9.29+dfsg'
with Debian dir 69ce4543d3e4a3bab2eed71e59ebd8c35a2fa366
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e8642d33 by Steffen Moeller at 2019-12-04T23:19:05Z
Upload to unstable

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30 changed files:

- README.md
- debian/changelog
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/banded_swipe_pipeline.cpp
- src/align/greedy_pipeline.cpp
- src/align/query_mapper.cpp
- src/align/query_mapper.h
- src/align/swipe_pipeline.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/match.h
- src/data/taxonomy.h
- src/dp/comp_based_stats.cpp
- src/dp/dp.h
- src/dp/score_vector.h
- + src/dp/score_vector_int16.h
- + src/dp/score_vector_int8.h
- src/dp/swipe/banded_3frame_swipe.cpp
- src/dp/swipe/banded_swipe.cpp
- src/dp/swipe/swipe.cpp
- src/dp/swipe/swipe.h
- src/dp/swipe/swipe_wrapper.cpp
- src/dp/swipe/target_iterator.h
- src/output/output.h
- src/output/output_sink.cpp
- src/run/double_indexed.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/def355ccd921b9829703552fa60ecc6f8a1481a8...e8642d330bf255334d1c6a26e1df6d2214571233

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View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/def355ccd921b9829703552fa60ecc6f8a1481a8...e8642d330bf255334d1c6a26e1df6d2214571233
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