[med-svn] [Git][med-team/discosnp][upstream] New upstream version 2.4.2

[Steffen Möller]

Steffen Möller pushed to branch upstream at Debian Med / discosnp


Commits:
1371e07e by Steffen Moeller at 2019-12-17T13:33:46Z
New upstream version 2.4.2
- - - - -


17 changed files:

- .DS_Store
- CMakeLists.txt
- README.md
- + discoSnpRAD/README.md
- + discoSnpRAD/clustering_scripts/discoRAD_clustering.sh
- + discoSnpRAD/clustering_scripts/fasta_and_cluster_to_filtered_vcf.py
- + discoSnpRAD/clustering_scripts/from_SRC_to_edges.py
- + discoSnpRAD/post-processing_scripts/1SNP_per_cluster.py
- + discoSnpRAD/post-processing_scripts/README.md
- + discoSnpRAD/post-processing_scripts/add_cluster_info_to_mapped_vcf.py
- + discoSnpRAD/post-processing_scripts/filter_by_cluster_size_and_rank.py
- scripts_RAD/filter_paralogs.py → discoSnpRAD/post-processing_scripts/filter_paralogs.py
- scripts_RAD/filter_vcf_by_indiv_cov_and_max_missing.py → discoSnpRAD/post-processing_scripts/filter_vcf_by_indiv_cov_max_missing_and_maf.py
- + discoSnpRAD/post-processing_scripts/vcf2structure.sh
- + discoSnpRAD/run_discoSnpRad.sh
- run_discoSnp++.sh
- + run_discoSnp++_ML.sh


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/discosnp/commit/1371e07e962ecbfb59bba53436e19b3508458bf4

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