[med-svn] [Git][med-team/pbbam][master] 6 commits: Provide generated files to autopkgtest

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / pbbam


Commits:
eafa0e99 by Andreas Tille at 2019-02-03T06:59:19Z
Provide generated files to autopkgtest

- - - - -
82b35ac4 by Andreas Tille at 2019-02-03T06:59:50Z
debhelper 12

- - - - -
d7973d00 by Andreas Tille at 2019-02-03T07:00:29Z
Standards-Version: 4.3.0

- - - - -
681c61ad by Andreas Tille at 2019-02-03T07:00:29Z
Secure URI in copyright format

- - - - -
eff4eed0 by Andreas Tille at 2019-02-03T07:00:29Z
Remove trailing whitespace in debian/copyright

- - - - -
ea16bf2e by Andreas Tille at 2019-02-03T07:10:46Z
Upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/tests/control


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,19 @@
+pbbam (0.19.0+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
+
+  [ Steve Langasek ]
+  * Provide generated files to autopkgtest
+    Closes: #921122
+
+  [ Andreas Tille ]
+  * debhelper 12
+  * Standards-Version: 4.3.0
+  * Secure URI in copyright format
+  * Remove trailing whitespace in debian/copyright
+
+ -- Andreas Tille <tille at debian.org>  Sun, 03 Feb 2019 08:00:29 +0100
+
 pbbam (0.19.0+dfsg-1) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-11
+12


=====================================
debian/control
=====================================
@@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Afif Elghraoui <afif at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper (>= 12~),
                dh-exec,
                d-shlibs,
                meson,
@@ -18,7 +18,7 @@ Build-Depends: debhelper (>= 11~),
                libgtest-dev,
                python-cram,
                samtools
-Standards-Version: 4.2.1
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/pbbam
 Vcs-Git: https://salsa.debian.org/med-team/pbbam.git
 Homepage: http://pbbam.readthedocs.org/en/latest/index.html
@@ -48,10 +48,10 @@ Multi-Arch: same
 Section: libs
 Depends: ${shlibs:Depends},
          ${misc:Depends}
+Pre-Depends: ${misc:Pre-Depends}
 Breaks: libpbbam (<< ${source:Version})
 Provides: libpbbam
 Replaces: libpbbam
-Pre-Depends: ${misc:Pre-Depends}
 Description: Pacific Biosciences binary alignment/map (BAM) library
  The BAM format is a binary, compressed, record-oriented container format
  for raw or aligned sequence reads. The associated SAM format is a text


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: pbbam
 Upstream-Contact: Pacific Biosciences <devnet at pacificbiosciences.com>
 Source: https://github.com/PacificBiosciences/pbbam
@@ -65,15 +65,15 @@ License: BSD-3-Clause
     without specific prior written permission.
  .
  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
- ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT 
- LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR 
+ ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
  A PARTICULAR PURPOSE ARE DISCLAIMED.  IN NO EVENT SHALL THE HOLDERS OR
- CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 
- EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 
- PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR 
- PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF 
- LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING 
- NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS 
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+ PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
+ PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+ LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
  SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 License: BSD-2-Clause


=====================================
debian/tests/control
=====================================
@@ -7,3 +7,5 @@ Depends:
 	samtools
 Restrictions:
 	rw-build-tree,
+	allow-stderr,
+	build-needed



View it on GitLab: https://salsa.debian.org/med-team/pbbam/compare/c0a82780f2d3957725dbed2a13f87ba7faed6404...ea16bf2e331bc19f76a5aec3fe0d62115587fd66

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbbam/compare/c0a82780f2d3957725dbed2a13f87ba7faed6404...ea16bf2e331bc19f76a5aec3fe0d62115587fd66
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