[med-svn] [Git][med-team/mothur][upstream] New upstream version 1.41.21

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / mothur


Commits:
715111a9 by Andreas Tille at 2019-01-29T21:51:45Z
New upstream version 1.41.21
- - - - -


30 changed files:

- INSTALL.md
- Makefile
- Mothur.xcodeproj/project.pbxproj
- − TestMothur/IntegrationTests/454sop.cpp
- − TestMothur/IntegrationTests/miseqsop.cpp
- − TestMothur/IntegrationTests/testintegrationalignseqs.cpp
- − TestMothur/IntegrationTests/testintegrationalignseqs.hpp
- + TestMothur/catch.hpp
- TestMothur/dataset.cpp
- TestMothur/dataset.h
- TestMothur/testcommands/testrenamefilecommand.cpp
- + TestMothur/testcontainers/testcounttable.cpp
- TestMothur/IntegrationTests/miseqsop.hpp → TestMothur/testcontainers/testcounttable.hpp
- TestMothur/testoptirefmatrix.cpp
- + TestMothur/testsubsample.cpp
- TestMothur/IntegrationTests/454sop.hpp → TestMothur/testsubsample.hpp
- makefile-internal
- source/calculators/ace.cpp
- source/calculators/boneh.cpp
- source/calculators/calculator.h
- source/calculators/chao1.cpp
- source/calculators/gower.cpp
- source/calculators/invsimpson.cpp
- source/calculators/mempearson.cpp
- source/calculators/sharedace.cpp
- source/calculators/sharedanderbergs.cpp
- source/calculators/sharedchao1.cpp
- source/calculators/sharedjackknife.cpp
- source/calculators/sharedjclass.cpp
- source/calculators/sharedjsd.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/mothur/commit/715111a9e1b1073203f065f159b961b5840546c7

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