[med-svn] [Git][med-team/snakemake][upstream] New upstream version 5.4.0

[Dylan Aïssi]

Dylan Aïssi pushed to branch upstream at Debian Med / snakemake


Commits:
e0d2b4e4 by Dylan Aïssi at 2019-01-03T07:12:54Z
New upstream version 5.4.0
- - - - -


30 changed files:

- CHANGELOG.rst
- docs/index.rst
- docs/project_info/faq.rst
- docs/snakefiles/modularization.rst
- docs/snakefiles/rules.rst
- docs/tutorial/additional_features.rst
- docs/tutorial/basics.rst
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/benchmark.py
- + snakemake/checkpoints.py
- snakemake/common.py
- snakemake/conda.py
- snakemake/dag.py
- snakemake/exceptions.py
- snakemake/executors.py
- snakemake/io.py
- snakemake/jobs.py
- snakemake/logging.py
- snakemake/parser.py
- snakemake/persistence.py
- snakemake/remote/SFTP.py
- snakemake/report/__init__.py
- snakemake/rules.py
- snakemake/scheduler.py
- snakemake/script.py
- snakemake/shell.py
- snakemake/singularity.py
- snakemake/utils.py
- snakemake/workflow.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/commit/e0d2b4e465b70f92857ca388ae4bdddcfb1e2820

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