[med-svn] [Git][med-team/mmseqs2][master] Fix copyright file
Shayan Doust
gitlab at salsa.debian.org
Fri Jul 19 13:47:21 BST 2019
Shayan Doust pushed to branch master at Debian Med / mmseqs2
Commits:
b654c5ac by Shayan Doust at 2019-07-19T03:05:43Z
Fix copyright file
- - - - -
1 changed file:
- debian/copyright
Changes:
=====================================
debian/copyright
=====================================
@@ -1,14 +1,14 @@
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: mmseqs2
Source: https://github.com/soedinglab/MMseqs2
+Comment: The system-wide option of these libraries are much preferred than that in lib/
Files-Excluded:
lib/gzstream
lib/zstd
-Comment: The system-wide option of these libraries are much preferred than that in lib/
Files: *
Copyright: 2016 Söding Lab <https://mpibpc.mpg.de/soeding>
-License: GPLv3
+License: GPL-3
Files: lib/alp/*
Copyright: 2008 John Spouge
@@ -20,11 +20,11 @@ License: public_domain
Files: lib/kseq2/*
Copyright: 2009 Milot Mirdita
-License: MIT
+License: Expat
Files: lib/ksw2/*
Copyright: 2009 Attractive Chaos <attractor at live.co.uk>
-License: MIT
+License: Expat
Files: lib/omptl/*
Copyright: 2006-2011 Fokko Beekhof <Fokko.Beekhof at unige.ch>
@@ -32,13 +32,32 @@ License: LGPL
Files: lib/tinyexpr/*
Copyright: 2015-2018 Lewin van Winkle
-License: Zlib-Libpng License
+License: zlib/libpng
Files: debian/*
Copyright: 2019 Shayan Doust <hello at shayandoust.me>
-License: GPLv3
+License: GPL-3
-License: GPLv3
+License: Expat
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included
+ in all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+ OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+ SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+License: GPL-3
This version of the GNU Lesser General Public License incorporates
the terms and conditions of version 3 of the GNU General Public
License, supplemented by the additional permissions listed below.
@@ -196,25 +215,165 @@ License: GPLv3
apply, that proxy's public statement of acceptance of any version is
permanent authorization for you to choose that version for the
Library.
-
-License: MIT
- Permission is hereby granted, free of charge, to any person obtaining a
- copy of this software and associated documentation files (the "Software"),
- to deal in the Software without restriction, including without limitation
- the rights to use, copy, modify, merge, publish, distribute, sublicense,
- and/or sell copies of the Software, and to permit persons to whom the
- Software is furnished to do so, subject to the following conditions:
+
+License: LGPL
+ This version of the GNU Lesser General Public License incorporates
+ the terms and conditions of version 3 of the GNU General Public
+ License, supplemented by the additional permissions listed below.
.
- The above copyright notice and this permission notice shall be included
- in all copies or substantial portions of the Software.
+ 0. Additional Definitions.
.
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
- OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
- MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
- IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
- CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
- TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
- SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+ As used herein, "this License" refers to version 3 of the GNU Lesser
+ General Public License, and the "GNU GPL" refers to version 3 of the GNU
+ General Public License.
+ .
+ "The Library" refers to a covered work governed by this License,
+ other than an Application or a Combined Work as defined below.
+ .
+ An "Application" is any work that makes use of an interface provided
+ by the Library, but which is not otherwise based on the Library.
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+ The "Corresponding Application Code" for a Combined Work means the
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+ .
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+ recombine or relink the Application with a modified version of
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+ manner specified by section 6 of the GNU GPL for conveying
+ Corresponding Source.
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+ a copy of the Library already present on the user's computer
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+ Application with a modified version of the Linked Version. (If
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+ the Minimal Corresponding Source and Corresponding Application
+ Code. If you use option 4d1, you must provide the Installation
+ Information in the manner specified by section 6 of the GNU GPL
+ for conveying Corresponding Source.)
+ .
+ 5. Combined Libraries.
+ .
+ You may place library facilities that are a work based on the
+ Library side by side in a single library together with other library
+ facilities that are not Applications and are not covered by this
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+ choice, if you do both of the following:
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+ on the Library, uncombined with any other library facilities,
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+ accompanying uncombined form of the same work.
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+ .
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+ differ in detail to address new problems or concerns.
+ .
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+ Library as you received it specifies that a certain numbered version
+ of the GNU Lesser General Public License "or any later version"
+ applies to it, you have the option of following the terms and
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+ received it does not specify a version number of the GNU Lesser
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License: public_domain
PUBLIC DOMAIN NOTICE
@@ -237,3 +396,22 @@ License: public_domain
particular purpose.
.
Please cite the author in any work or product based on this material.
+
+License: zlib/libpng
+ This software is provided 'as-is', without any express or implied warranty.
+ In no event will the authors be held liable for any damages arising from the
+ use of this software.
+ .
+ Permission is granted to anyone to use this software for any purpose, including
+ commercial applications, and to alter it and redistribute it freely, subject to
+ the following restrictions:
+ .
+ 1. The origin of this software must not be misrepresented; you must not claim
+ that you wrote the original software. If you use this software in a product,
+ an acknowledgment in the product documentation would be appreciated but
+ is not required.
+ .
+ 2. Altered source versions must be plainly marked as such, and must not be
+ misrepresented as being the original software.
+ .
+ 3. This notice may not be removed or altered from any source distribution.
View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/commit/b654c5ac1d161eaf56d3ec8a2c14676718924ada
--
View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/commit/b654c5ac1d161eaf56d3ec8a2c14676718924ada
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