[med-svn] [Git][med-team/bcbio][master] Add some URLs

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bcbio


Commits:
47e02d0e by Andreas Tille at 2019-03-21T14:51:26Z
Add some URLs

- - - - -


1 changed file:

- debian/TODO


Changes:

=====================================
debian/TODO
=====================================
@@ -28,6 +28,7 @@ https://github.com/brentp/vcfanno
 Now at https://github.com/AdamaJava/adamajava
 
 Package OptiTypePipeline
+  https://github.com/indraniel/OptiType ??
 
 add hisat2_extract_splice_sites.py to the hisat2 package
 
@@ -40,6 +41,7 @@ https://github.com/kingsfordgroup/sailfish
 package stringtie - done: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=924101
 
 package kallisto
+https://github.com/pachterlab/kallisto
 
 package r-wasabi
 https://github.com/COMBINE-lab/wasabi
@@ -51,6 +53,7 @@ package hts_nim_tools
 https://github.com/brentp/hts-nim-tools
 
 package Python module geneimpacts
+https://pypi.org/project/geneimpacts/
 
 package seqcluster
 https://github.com/lpantano/seqcluster/archive/1824d37.tar.gz



View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/47e02d0edfb02ca0e92db779d7743ac0905b26fd

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View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/47e02d0edfb02ca0e92db779d7743ac0905b26fd
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