[med-svn] [Git][med-team/spoa][debian/stretch-backports] 31 commits: Do not build with -march

[Andreas Tille]

Andreas Tille pushed to branch debian/stretch-backports at Debian Med / spoa


Commits:
ebf2f14f by Andreas Tille at 2018-11-03T06:22:32Z
Do not build with -march

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f3715d26 by Andreas Tille at 2018-11-03T06:23:00Z
Remove trailing whitespace in debian/copyright

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3692bf0a by Andreas Tille at 2018-11-03T06:38:32Z
Mark some symbols as optional

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23b8d386 by Andreas Tille at 2018-11-03T06:39:49Z
Upload to unstable

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71ad0509 by Andreas Tille at 2018-12-06T11:13:17Z
Set architecture to amd64 since the code is not really portable

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be43d11c by Andreas Tille at 2018-12-06T11:15:14Z
Upload to unstable

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b53870fb by Andreas Tille at 2019-01-28T19:04:57Z
Update upstream source from tag 'upstream/1.1.5'

Update to upstream version '1.1.5'
with Debian dir aaf1b9c8c2dc3a33dfd0f9e2b591f899d5039f42
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fe7cc825 by Andreas Tille at 2019-01-28T19:04:57Z
New upstream version 1.1.5
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c4cb7070 by Andreas Tille at 2019-01-28T19:04:58Z
New upstream version

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332c6d71 by Andreas Tille at 2019-01-28T19:04:58Z
debhelper 12

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390b4a4d by Andreas Tille at 2019-01-28T19:05:03Z
Standards-Version: 4.3.0

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873e98aa by Andreas Tille at 2019-01-28T19:58:39Z
Upstream changed ABI and we stick here to the broken way to set soversion = version but upstream was informed to invent better soversions
    https://github.com/rvaser/spoa/issues/14

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a1bf52d5 by Andreas Tille at 2019-01-28T20:14:30Z
Upload to unstable

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5a2e4f4a by Andreas Tille at 2019-07-12T19:06:19Z
New upstream version 3.0.0
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b4a493d9 by Andreas Tille at 2019-07-12T19:06:20Z
Update upstream source from tag 'upstream/3.0.0'

Update to upstream version '3.0.0'
with Debian dir 0e8b16b6e0672eb84fbd93c65f39f0ce958086fe
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e6a81779 by Andreas Tille at 2019-07-12T19:06:20Z
New upstream version

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75eb20c3 by Andreas Tille at 2019-07-12T19:06:23Z
Standards-Version: 4.4.0

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6c649a05 by Andreas Tille at 2019-07-12T19:35:34Z
Adapt patches

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e7c4827b by Andreas Tille at 2019-07-12T19:45:59Z
Needs newer version of libbioparser-dev

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a419d24f by Andreas Tille at 2019-07-15T13:16:23Z
Versioned Build-Depends: libbioparser-dev (>= 2.0)

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b171811d by Andreas Tille at 2019-07-15T14:10:39Z
Bump soversion to 3

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4b50f7d0 by Andreas Tille at 2019-07-15T14:28:13Z
dh_makeshlibs diff

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9be03132 by Andreas Tille at 2019-07-15T14:30:42Z
Upload to unstable

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b597239e by Andreas Tille at 2019-09-16T11:24:12Z
Fix symbols file

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33f990e7 by Andreas Tille at 2019-09-16T11:24:40Z
New upstream version 3.0.1
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b3a65411 by Andreas Tille at 2019-09-16T11:24:40Z
New upstream version

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997ab731 by Andreas Tille at 2019-09-16T11:24:41Z
Update upstream source from tag 'upstream/3.0.1'

Update to upstream version '3.0.1'
with Debian dir e2eafb78e79c30d31ee8b11ca49b4e5785151a0e
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60e1a4e5 by Andreas Tille at 2019-09-16T11:24:41Z
debhelper-compat 12

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6a64908d by Andreas Tille at 2019-09-16T11:26:59Z
Upload to unstable

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755cee49 by Andreas Tille at 2019-11-12T15:10:39Z
Merge tag 'debian/3.0.1-1' into debian/stretch-backports

spoa Debian release 3.0.1-1

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ac371fdc by Andreas Tille at 2019-11-12T15:12:23Z
Rebuild for stretch-backports

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20 changed files:

- CMakeLists.txt
- README.md
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/patches/fix_soversion.patch
- debian/patches/series
- debian/patches/shared_and_static.patch
- debian/patches/use_debian_packaged_libs.patch
- debian/rules
- include/spoa/alignment_engine.hpp
- include/spoa/graph.hpp
- src/alignment_engine.cpp
- src/graph.cpp
- src/main.cpp
- src/sequence.cpp
- src/sequence.hpp
- src/simd_alignment_engine.cpp
- src/simd_alignment_engine.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/spoa/compare/0de6cd42161c30faff5e90d967029f5d10a3e0ce...ac371fdc2b2cbb57572d9d3c6e4641d3169764dd

-- 
View it on GitLab: https://salsa.debian.org/med-team/spoa/compare/0de6cd42161c30faff5e90d967029f5d10a3e0ce...ac371fdc2b2cbb57572d9d3c6e4641d3169764dd
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