[med-svn] [Git][med-team/snakemake][master] 10 commits: New upstream version

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / snakemake


Commits:
0b2c3718 by Michael R. Crusoe at 2019-11-15T13:23:48Z
New upstream version

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9f1d683e by Michael R. Crusoe at 2019-11-15T13:23:48Z
New upstream version 5.8.0
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43c3106b by Michael R. Crusoe at 2019-11-15T13:23:56Z
Update upstream source from tag 'upstream/5.8.0'

Update to upstream version '5.8.0'
with Debian dir 3d8b8556f7e10a15d53d977bdd8876379ea669e8
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238e880f by Michael R. Crusoe at 2019-11-15T13:31:33Z
refresh patches

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0e6628ab by Michael R. Crusoe at 2019-11-15T13:44:59Z
disable new tests that require boto/moto or singularity

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cbd4f670 by Michael R. Crusoe at 2019-11-15T14:36:05Z
add the reporting deps

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c646d8f4 by Michael R. Crusoe at 2019-11-15T14:36:28Z
New upstream version

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b0aad4a0 by Michael R. Crusoe at 2019-11-15T14:36:29Z
New upstream version 5.8.1
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23db5a2c by Michael R. Crusoe at 2019-11-15T14:36:37Z
Update upstream source from tag 'upstream/5.8.1'

Update to upstream version '5.8.1'
with Debian dir 013b73b7abc1b2f375b091622073ef141cd25fb3
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40c648af by Michael R. Crusoe at 2019-11-15T14:55:45Z
release

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30 changed files:

- − .coveragerc
- .github/workflows/main.yml
- CHANGELOG.rst
- LICENSE.md
- README.md
- debian/changelog
- debian/control
- debian/patches/0011-fix-privacy-breach.patch
- debian/patches/0012-reproducible-build.patch
- debian/patches/python3
- debian/rules
- debian/tests/run-unit-test
- + docs/executing/caching.rst
- + docs/executing/cli.rst
- docs/executable.rst → docs/executing/cluster-cloud.rst
- + docs/executing/interoperability.rst
- docs/getting_started/examples.rst
- docs/index.rst
- docs/project_info/contributing.rst
- docs/snakefiles/reporting.rst
- docs/snakefiles/rules.rst
- + format.sh
- misc/vim/syntax/snakemake.vim
- setup.py
- snakemake/__init__.py
- snakemake/_version.py
- + snakemake/caching/__init__.py
- + snakemake/caching/hash.py
- + snakemake/caching/local.py
- + snakemake/caching/remote.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/compare/f0683707ae617ce248adce72053217f110758e33...40c648afe786196da8c53d8fc96b636280715938

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/compare/f0683707ae617ce248adce72053217f110758e33...40c648afe786196da8c53d8fc96b636280715938
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