[med-svn] [Git][med-team/python-pysam][master] 13 commits: New upstream version 0.15.3+ds

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / python-pysam


Commits:
169a6288 by Michael R. Crusoe at 2019-08-06T17:37:29Z
New upstream version 0.15.3+ds
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48e9c2b1 by Michael R. Crusoe at 2019-08-06T17:37:37Z
Update upstream source from tag 'upstream/0.15.3+ds'

Update to upstream version '0.15.3+ds'
with Debian dir 307bac42b790b1d11795bf9ce3e9403377717f16
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1e170049 by Michael R. Crusoe at 2019-08-06T17:41:03Z
0.15.3+ds-1

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feea4660 by Michael R. Crusoe at 2019-08-06T17:54:19Z
drop python2

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fbb8276b by Michael R. Crusoe at 2019-11-17T16:34:03Z
Revert "drop python2"

This reverts commit feea4660e2dfdd2702594e1eee0bae3c53c6d3cb.

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d302ec3a by Michael R. Crusoe at 2019-11-17T16:35:26Z
document why we aren't dropping py2 yet

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35e12040 by Michael R. Crusoe at 2019-11-17T16:36:53Z
debhelper-compat 12

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ea7ea681 by Michael R. Crusoe at 2019-11-17T16:37:04Z
Standards-Version: 4.4.0

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c00a31ea by Michael R. Crusoe at 2019-11-17T16:37:05Z
Trim trailing whitespace.

Fixes lintian: file-contains-trailing-whitespace
See https://lintian.debian.org/tags/file-contains-trailing-whitespace.html for more details.

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e11ce0dc by Michael R. Crusoe at 2019-11-17T16:37:11Z
Use secure URI in Homepage field.

Fixes lintian: homepage-field-uses-insecure-uri
See https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html for more details.

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58b1a079 by Michael R. Crusoe at 2019-11-17T16:37:13Z
Set upstream metadata fields: Repository.
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c7d31c59 by Michael R. Crusoe at 2019-11-17T17:37:21Z
remove unused autopkgtests

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a54a1772 by Michael R. Crusoe at 2019-11-17T17:38:56Z
set HOME for autopkgtests

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30 changed files:

- .gitignore
- .travis.yml
- NEWS
- README.rst
- bcftools/bcftools.pysam.c
- bcftools/bcftools.pysam.h
- debian/changelog
- − debian/compat
- debian/control
- debian/patches/series
- − debian/patches/skip_test_needing_missing_data.patch
- debian/patches/skip_test_remote.patch
- debian/patches/spelling
- − debian/patches/test_index_not_compression
- debian/rules
- debian/tests/control
- − debian/tests/run-nose-tests
- − debian/tests/run-nose3-tests
- debian/upstream/metadata
- devtools/buildwheels.sh
- devtools/import.py
- devtools/run_tests_travis.sh
- doc/api.rst
- doc/glossary.rst
- doc/release.rst
- doc/usage.rst
- import/pysam.c
- import/pysam.h
- pysam/htslib_util.h
- pysam/libcalignedsegment.pxd


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-pysam/compare/3eafe2c2c8d68fc192e4dba24ae05ef94076cef1...a54a17724b162b43b561c86a871e92006e87f97a

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-pysam/compare/3eafe2c2c8d68fc192e4dba24ae05ef94076cef1...a54a17724b162b43b561c86a871e92006e87f97a
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