[med-svn] [Git][med-team/beagle][master] 3 commits: New upstream version 5.1-191108+dfsg

[Dylan Aïssi]

Dylan Aïssi pushed to branch master at Debian Med / beagle


Commits:
0d3b277c by Dylan Aïssi at 2019-11-20T07:00:27Z
New upstream version 5.1-191108+dfsg
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91c1a0fd by Dylan Aïssi at 2019-11-20T07:00:28Z
Update upstream source from tag 'upstream/5.1-191108+dfsg'

Update to upstream version '5.1-191108+dfsg'
with Debian dir 2f30039be37d85de58511522825726b3e197dfd1
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70db7119 by Dylan Aïssi at 2019-11-20T07:01:46Z
Update d/changelog

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30 changed files:

- − beagleutil/Phase.java
- + blbutil/MultiThreadUtils.java
- blbutil/SampleFileIt.java
- blbutil/Utilities.java
- bref/AsIsBref3Writer.java
- bref/Bref3.java
- bref/Bref3It.java
- bref/Bref3Reader.java
- bref/BrefWriter.java
- bref/CompressBref3Writer.java
- bref/SeqCoder3.java
- debian/changelog
- imp/HaplotypeCoder.java
- imp/ImpData.java
- imp/ImpIbs.java
- imp/ImpStates.java
- imp/ImputedRecBuilder.java
- imp/ImputedVcfWriter.java
- main/Main.java
- main/MainHelper.java
- main/Par.java
- main/Pedigree.java
- main/RunStats.java
- main/WindowWriter.java
- phase/EstPhase.java
- phase/FixedPhaseData.java
- phase/HapImputer.java
- phase/PhaseBaum1.java
- phase/PhaseData.java
- phase/PhaseLS.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/beagle/compare/6f07f7a74de2cc1092cdf4ed933ebfb166040446...70db7119cda1578cec6d24f59a0f4a91267624c9

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View it on GitLab: https://salsa.debian.org/med-team/beagle/compare/6f07f7a74de2cc1092cdf4ed933ebfb166040446...70db7119cda1578cec6d24f59a0f4a91267624c9
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