[med-svn] [Git][med-team/rna-star][master] 6 commits: New upstream version 2.7.3a+dfsg

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / rna-star


Commits:
021e04f5 by Sascha Steinbiss at 2019-10-09T22:24:39Z
New upstream version 2.7.3a+dfsg
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615ae1b4 by Sascha Steinbiss at 2019-10-09T22:24:40Z
Update upstream source from tag 'upstream/2.7.3a+dfsg'

Update to upstream version '2.7.3a+dfsg'
with Debian dir 8dfdb9b1dd653b807355644a8e331c37e9cc20d2
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01d5795d by Sascha Steinbiss at 2019-10-09T22:51:06Z
new upstream version

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70d4f992 by Sascha Steinbiss at 2019-10-09T22:51:18Z
refresh patch

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eceb928b by Sascha Steinbiss at 2019-10-09T22:51:30Z
bump Standards-Version

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82d18864 by Sascha Steinbiss at 2019-10-09T22:51:41Z
use debhelper 12

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30 changed files:

- CHANGES.md
- README.md
- RELEASEnotes.md
- debian/changelog
- debian/compat
- debian/control
- debian/patches/donotuse_own_htslib.patch
- doc/STARmanual.pdf
- docs/STARsolo.md
- extras/doc-latex/STARmanual.tex
- extras/doc-latex/parametersDefault.tex
- extras/docker/Dockerfile
- + source/AlignVsTranscript.h
- source/BAMbinSortByCoordinate.cpp
- source/BAMbinSortByCoordinate.h
- source/BAMbinSortUnmapped.cpp
- source/BAMbinSortUnmapped.h
- source/BAMfunctions.cpp
- source/BAMfunctions.h
- source/BAMoutput.cpp
- source/IncludeDefine.h
- source/Makefile
- source/Parameters.cpp
- source/Parameters.h
- source/ParametersChimeric_initialize.cpp
- source/ParametersSolo.cpp
- source/ParametersSolo.h
- source/ReadAlign.h
- source/ReadAlignChunk_processChunks.cpp
- source/ReadAlign_alignBAM.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/752ab6539d5617b12f7791e06a3f9da4f21cbcac...82d188649a0dec518088e8e07db5d63c08f61df4

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View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/752ab6539d5617b12f7791e06a3f9da4f21cbcac...82d188649a0dec518088e8e07db5d63c08f61df4
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