[med-svn] [Git][med-team/ncbi-blastplus][master] ncbi-blast+ 2.8.1-2: Convert Python script via 2to3 (#937121).

[Aaron M. Ucko]

Aaron M. Ucko pushed to branch master at Debian Med / ncbi-blastplus


Commits:
bf626a64 by Aaron M. Ucko at 2019-09-02T00:52:30Z
ncbi-blast+ 2.8.1-2: Convert Python script via 2to3 (#937121).

Convert windowmasker_2.2.22_adapter to Python 3 via 2to3;
update (build-)dependencies accordingly.  (Closes: #937121.)

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+ncbi-blast+ (2.8.1-2) unstable; urgency=medium
+
+  * Convert windowmasker_2.2.22_adapter to Python 3 via 2to3;
+    update (build-)dependencies accordingly.  (Closes: #937121.)
+
+ -- Aaron M. Ucko <ucko at debian.org>  Sun, 01 Sep 2019 20:50:43 -0400
+
 ncbi-blast+ (2.8.1-1) unstable; urgency=medium
 
   * New upstream release.


=====================================
debian/control
=====================================
@@ -6,7 +6,8 @@ Uploaders: Olivier Sallou <osallou at debian.org>,
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 11~)
-Build-Depends-Arch: autotools-dev,
+Build-Depends-Arch: 2to3,
+               autotools-dev,
                libboost-test-dev,
                libbz2-dev,
                libc-dev-bin,
@@ -26,7 +27,7 @@ Package: ncbi-blast+
 Architecture: any
 Multi-Arch: foreign
 Depends: ncbi-data,
-         python,
+         python3,
          ${misc:Depends},
          ${perl:Depends},
          ${shlibs:Depends}


=====================================
debian/rules
=====================================
@@ -81,8 +81,11 @@ override_dh_install-arch:
 	mv $(instroot)/bin/seedtop $(instroot)/bin/seedtop+
 	mv $(instroot)/bin/legacy_blast.pl   $(instroot)/bin/legacy_blast
 	mv $(instroot)/bin/update_blastdb.pl $(instroot)/bin/update_blastdb
-	mv $(instroot)/bin/windowmasker_2.2.22_adapter.py \
-	   $(instroot)/bin/windowmasker_2.2.22_adapter
+	sed -e '1s/$$/3/' $(instroot)/bin/windowmasker_2.2.22_adapter.py \
+	   > $(instroot)/bin/windowmasker_2.2.22_adapter
+	2to3 -w $(instroot)/bin/windowmasker_2.2.22_adapter
+	chmod +x $(instroot)/bin/windowmasker_2.2.22_adapter
+	rm $(instroot)/bin/windowmasker_2.2.22_adapter.py
 # Clean up tests, demos, and internal build tools
 	rm -f $(instroot)/bin/*test* $(instroot)/bin/seqdb_demo \
 	    $(instroot)/bin/datatool $(instroot)/bin/run_with_lock \



View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/commit/bf626a6452c61561398d5f5125b36aca24c628a1

-- 
View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/commit/bf626a6452c61561398d5f5125b36aca24c628a1
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