[med-svn] [Git][med-team/beagle][upstream] New upstream version 5.1-190824+dfsg

[Dylan Aïssi]

Dylan Aïssi pushed to branch upstream at Debian Med / beagle


Commits:
9ea91de8 by Dylan Aïssi at 2019-09-09T20:06:42Z
New upstream version 5.1-190824+dfsg
- - - - -


26 changed files:

- beagleutil/ChromInterval.java
- beagleutil/IntInterval.java
- + beagleutil/PbwtUpdater.java
- haplotype/HapPair.java → blbutil/DoubleArray.java
- blbutil/FloatArray.java
- blbutil/InputIt.java
- blbutil/Utilities.java
- bref/Bref3Reader.java
- bref/SeqCoder3.java
- − haplotype/BitHapPair.java
- − haplotype/WrappedHapPair.java
- + imp/CodedSteps.java
- imp/HaplotypeCoder.java
- imp/ImpData.java
- imp/ImpIbs.java
- imp/ImpLSBaum.java
- imp/ImpStates.java
- imp/ImputedVcfWriter.java
- imp/RefHapHash.java
- ints/IntArray.java
- ints/IntMap.java → ints/IntIntMap.java
- ints/IntList.java
- − ints/IntSet.java
- + main/CompHapSegment.java
- − main/CurrentData.java
- main/Main.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/beagle/commit/9ea91de8884359f05f558faf0e8795e35f8cd66b

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View it on GitLab: https://salsa.debian.org/med-team/beagle/commit/9ea91de8884359f05f558faf0e8795e35f8cd66b
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