[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Thu Apr 2 02:44:30 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
ad98131f by Andreas Tille at 2020-04-02T01:44:26+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
+Last-Update: Thu, 02 Apr 2020 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------


=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
+Last-Update: Thu, 02 Apr 2020 01:42:03 +0000
 
  source                        |             version             |        upstream_version         |                     uploaders                                           | Last uploader        |     Last uploaded      
 -------------------------------+---------------------------------+---------------------------------+-------------------------------------------------------------------------+----------------------+------------------------
@@ -61,13 +61,14 @@ Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
  spades                        | 3.13.1                          | 3.14.0                          | Alexandre Mestiashvili,Andreas Tille,Michael R. Crusoe,Sascha Steinbiss | Andreas Tille        | 2019-11-22 10:05:04+00
  sra-sdk                       | 2.9.3                           | 2.10.4                          | Andreas Tille,Charles Plessy                                            | Steffen Moeller      | 2018-10-23 20:40:02+00
  stacks                        | 2.52                            | 2.53                            | Andreas Tille,Tim Booth                                                 | Steffen Moeller      | 2020-03-26 02:50:13+00
+ sumaclust                     | 1.0.34                          | 1.0.35                          | Andreas Tille,Tim Booth                                                 | Andreas Tille        | 2020-04-01 13:18:58+00
  sumatra                       | 1.0.31                          | 1.0.34                          | Andreas Tille,Tim Booth                                                 | Andreas Tille        | 2018-10-16 10:06:33+00
  t-coffee                      | 12.00.7fb08c2                   | 13.41.0.28bdc39                 | Andreas Tille,Steffen Moeller                                           | Andreas Tille        | 2019-02-15 07:57:10+00
  umis                          | 1.0.6                           | 1.0.7                           | Andreas Tille                                                           | Andreas Tille        | 2020-01-27 07:34:12+00
  unanimity                     | 3.3.0                           | 4.2.0-1                         | Afif Elghraoui,Andreas Tille                                            | Adrian Bunk          | 2019-02-06 07:34:42+00
  vsearch                       | 2.14.1                          | 2.14.2                          | Andreas Tille,Tim Booth                                                 | Andreas Tille        | 2019-12-17 10:07:09+00
  xmedcon                       | 0.16.1                          | 0.16.2                          | Andreas Tille,Roland Marcus Rutschmann                                  | Andreas Tille        | 2019-01-25 18:23:59+00
-(65 rows)
+(66 rows)
 
 
  source                        |   id   | severity  |                                                                                               title                                                                                               
@@ -89,7 +90,6 @@ Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
  biojava4-live                 | 843712 | normal    | biojava4-live: FTBFS (failing tests)
  biojava-live                  | 659824 | minor     | biojava-live: New version available
  biomaj3                       | 950914 | minor     | python3-biomaj3: Depends on python-influxdb wich ftbs, patch to remove dependency
- bioperl-run                   | 954511 | serious   | bioperl-run: FTBFS: dh_auto_test: error: perl Build test --verbose 1 returned exit code 255
  bwa                           | 942447 | normal    | Build bwa on ppc64el
  camp                          | 900181 | normal    | camp: FTBFS on 32bit big endian: check metaclass->function("f4").call(object, camp::Args(1, 4, 15)).to<unsigned long>() == 20 has failed
  clonalorigin                  | 884475 | wishlist  | clonalorigin: FTBFS on alpha: tests time out
@@ -261,8 +261,6 @@ Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
  sprai                         | 943280 | normal    | sprai: Python2 removal in sid/bullseye
  sra-sdk                       | 943231 | normal    | sra-sdk: Python2 removal in sid/bullseye
  sra-sdk                       | 952623 | serious   | sra-sdk: FTBFS: ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to `vdb_mbedtls_entropy_init'
- sumaclust                     | 952093 | serious   | sumaclust: FTBFS: mtcompare_sumaclust.c:18:10: fatal error: libfasta/sequence.h: No such file or directory
- sumaclust                     | 954262 | serious   | src:sumaclust: fails to migrate to testing for too long
  tree-puzzle                   | 806214 | normal    | tree-puzzle: Package fails test suite
  tree-puzzle                   | 890790 | minor     | tree-puzzle: Please provide autopkgtest
  tree-puzzle                   | 951984 | serious   | tree-puzzle: FTBFS: mpi.h:322:57: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."
@@ -273,5 +271,5 @@ Last-Update: Wed, 01 Apr 2020 13:42:04 +0000
  xmedcon                       | 671828 | normal    | xmedcon: Cannot open file with YBR photometric interpretation
  xmedcon                       | 779707 | normal    | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
  xmedcon                       | 924017 | normal    | desktop entry
-(201 rows)
+(198 rows)
 



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ad98131ffa202ccd7b5389cc67614684a69e72a2

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ad98131ffa202ccd7b5389cc67614684a69e72a2
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