[med-svn] [Git][med-team/python-skbio][master] 9 commits: New upstream version 0.5.6

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / python-skbio


Commits:
9902940d by Michael R. Crusoe at 2020-04-01T12:40:33+02:00
New upstream version 0.5.6
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79a6ce0b by Michael R. Crusoe at 2020-04-01T12:40:33+02:00
routine-update: New upstream version

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fb2aa8f0 by Michael R. Crusoe at 2020-04-01T12:40:51+02:00
Update upstream source from tag 'upstream/0.5.6'

Update to upstream version '0.5.6'
with Debian dir e5e80856a1355c271b8146eedca6e6671a399446
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2654c2ac by Michael R. Crusoe at 2020-04-01T12:43:01+02:00
Remove patches incorporated upstream

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45223ef6 by Michael R. Crusoe at 2020-04-01T12:43:41+02:00
routine-update: DEB_BUILD_OPTIONS allow override_dh_auto_test

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14f22e1a by Michael R. Crusoe at 2020-04-01T12:43:42+02:00
routine-update: Add salsa-ci file

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0fc6b008 by Michael R. Crusoe at 2020-04-01T12:43:42+02:00
routine-update: Rules-Requires-Root: no

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ed3bfa7f by Michael R. Crusoe at 2020-04-07T16:07:54+02:00
Runt the tests in the autopkgtest the same way we do during build-time: using pytest

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f7a56f55 by Michael R. Crusoe at 2020-04-07T16:08:16+02:00
release 0.5.6-1 to unstable

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30 changed files:

- .gitignore
- .travis.yml
- CHANGELOG.md
- Makefile
- README.rst
- debian/changelog
- debian/control
- − debian/patches/6497020.patch
- − debian/patches/9c061da7e2746aee403b41621f71b118ce5c52f8.patch
- debian/patches/ignore_failing_patches.patch
- debian/patches/mathjax-path
- − debian/patches/pandas_1_0_1
- debian/patches/series
- debian/rules
- + debian/salsa-ci.yml
- debian/tests/testsuite
- doc/source/conf.py
- setup.py
- skbio/__init__.py
- skbio/alignment/__init__.py
- skbio/alignment/_pairwise.py
- skbio/alignment/_ssw_wrapper.c
- skbio/alignment/_ssw_wrapper.pyx
- skbio/alignment/_tabular_msa.py
- skbio/alignment/tests/test_ssw.py
- skbio/alignment/tests/test_tabular_msa.py
- skbio/diversity/_driver.py
- skbio/diversity/_phylogenetic.c
- skbio/diversity/_util.py
- skbio/diversity/tests/test_util.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/compare/7e93670b9724e72b793d74044887069f29671dd0...f7a56f5564d7c114d016a9fed0883f28b22ea9d5

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View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/compare/7e93670b9724e72b793d74044887069f29671dd0...f7a56f5564d7c114d016a9fed0883f28b22ea9d5
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