[med-svn] [Git][med-team/python-skbio][upstream] New upstream version 0.5.6

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / python-skbio


Commits:
9902940d by Michael R. Crusoe at 2020-04-01T12:40:33+02:00
New upstream version 0.5.6
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30 changed files:

- .gitignore
- .travis.yml
- CHANGELOG.md
- Makefile
- README.rst
- doc/source/conf.py
- setup.py
- skbio/__init__.py
- skbio/alignment/__init__.py
- skbio/alignment/_pairwise.py
- skbio/alignment/_ssw_wrapper.c
- skbio/alignment/_ssw_wrapper.pyx
- skbio/alignment/_tabular_msa.py
- skbio/alignment/tests/test_ssw.py
- skbio/alignment/tests/test_tabular_msa.py
- skbio/diversity/_driver.py
- skbio/diversity/_phylogenetic.c
- skbio/diversity/_util.py
- skbio/diversity/tests/test_util.py
- skbio/io/format/newick.py
- skbio/io/format/tests/test_ordination.py
- skbio/io/format/tests/test_stockholm.py
- skbio/metadata/_intersection.c
- skbio/sequence/_grammared_sequence.py
- skbio/sequence/_protein.py
- skbio/sequence/_sequence.py
- skbio/sequence/tests/test_genetic_code.py
- skbio/sequence/tests/test_grammared_sequence.py
- skbio/sequence/tests/test_protein.py
- skbio/sequence/tests/test_sequence.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/commit/9902940d099af611ac6dc32a5b8e5f83828c8611

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