[med-svn] [Git][med-team/augur][master] 7 commits: New upstream version 7.0.2

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / augur


Commits:
3242c256 by Andreas Tille at 2020-04-08T15:27:14+02:00
New upstream version 7.0.2
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cae9945d by Andreas Tille at 2020-04-08T15:27:14+02:00
routine-update: New upstream version

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2a3fefa4 by Andreas Tille at 2020-04-08T15:28:17+02:00
Update upstream source from tag 'upstream/7.0.2'

Update to upstream version '7.0.2'
with Debian dir 3366f0f30f402cb05f33f6184a803134fcb0c5d1
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30180870 by Andreas Tille at 2020-04-08T16:08:11+02:00
Build-Depends: python3-freezegun

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12ea7069 by Andreas Tille at 2020-04-08T16:42:43+02:00
Depends: mafft,iqtree, raxml, fasttree, vcftools

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f1dcb8c4 by Andreas Tille at 2020-04-08T16:49:32+02:00
Build-Depends: python3-pytest-mock

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c1242f0c by Andreas Tille at 2020-04-08T16:53:28+02:00
Upload to unstable

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30 changed files:

- + .coveragerc
- .gitignore
- .travis.yml
- CHANGES.md
- + DEV_DOCS.md
- README.md
- augur/__version__.py
- augur/align.py
- augur/ancestral.py
- augur/clades.py
- augur/filter.py
- augur/import_beast.py
- augur/mask.py
- augur/refine.py
- augur/sequence_traits.py
- augur/traits.py
- augur/translate.py
- augur/utils.py
- debian/changelog
- debian/control
- docs/faq/clades.md
- docs/installation/installation.md
- docs/tutorials/tb_tutorial.md
- pytest.python3.ini
- + run_tests.sh
- scripts/s3.py
- scripts/swap_colors.py
- setup.py
- tests/builds/add_to_alignment/Snakefile
- tests/builds/tb/Snakefile


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augur/-/compare/5872d2fdffc6472f32b727017e98dbc8fb50c7d8...c1242f0c46f18619393111ae3e91b0b429a2f075

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View it on GitLab: https://salsa.debian.org/med-team/augur/-/compare/5872d2fdffc6472f32b727017e98dbc8fb50c7d8...c1242f0c46f18619393111ae3e91b0b429a2f075
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