[med-svn] [Git][med-team/trinityrnaseq][master] r-bioc-edger is back!

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq


Commits:
d1a9ff02 by Michael R. Crusoe at 2020-04-08T18:30:50+02:00
r-bioc-edger is back!

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=====================================
debian/changelog
=====================================
@@ -4,7 +4,7 @@ trinityrnaseq (2.8.6+dfsg-1) UNRELEASED; urgency=medium
   * New upstream release
   * debhelper-compat 12
   * Standards-Version: 4.4.0
-  * TODO: autopkgtests fail: "there is no package called edgeR"
+  * TODO: autopkgtests fail: "there is no package called ROTS"
 
  -- Michael R. Crusoe <michael.crusoe at gmail.com>  Mon, 14 Oct 2019 10:52:51 +0200
 


=====================================
debian/control
=====================================
@@ -16,7 +16,9 @@ Build-Depends: debhelper-compat (= 12),
                bowtie2,
                salmon,
                zlib1g-dev,
-               cmake
+               cmake,
+               r-bioc-edger,
+               r-bioc-deseq2
 Standards-Version: 4.4.0
 Vcs-Browser: https://salsa.debian.org/med-team/trinityrnaseq
 Vcs-Git: https://salsa.debian.org/med-team/trinityrnaseq.git
@@ -46,7 +48,9 @@ Depends: ${shlibs:Depends},
          salmon,
          python3-numpy,
          ncbi-blast+,
-         python3
+         python3,
+         r-bioc-edger,
+         r-bioc-deseq2
 Recommends: ${java:Recommends},
             trinityrnaseq-examples
 Suggests: collectl



View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/commit/d1a9ff02b65a7ffb7f064617b45dd1f53c1a203a

-- 
View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/commit/d1a9ff02b65a7ffb7f064617b45dd1f53c1a203a
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