[med-svn] [Git][med-team/snakemake][master] 2 commits: Exclude lazy_property to make Sphinx succeed.

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / snakemake


Commits:
42e38a52 by Andreas Tille at 2020-04-09T10:40:29+02:00
Exclude lazy_property to make Sphinx succeed.

- - - - -
13a15261 by Andreas Tille at 2020-04-09T11:17:36+02:00
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/patches/series
- + debian/patches/workaround_sphinx_issue.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+snakemake (5.10.0-3) unstable; urgency=medium
+
+  * Team upload.
+
+  [ Rebecca N. Palmer ] 
+  * Exclude lazy_property to make Sphinx succeed.
+    Closes: #955056
+
+ -- Andreas Tille <tille at debian.org>  Thu, 09 Apr 2020 11:09:24 +0200
+
 snakemake (5.10.0-2) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/patches/series
=====================================
@@ -11,3 +11,4 @@
 0011-fix-privacy-breach.patch
 boto3_is_just_boto
 python3
+workaround_sphinx_issue.patch


=====================================
debian/patches/workaround_sphinx_issue.patch
=====================================
@@ -0,0 +1,21 @@
+From: "Rebecca N. Palmer" <rebecca_palmer at zoho.com>
+Date: Wed, 8 Apr 2020 22:13:19 +0100
+Bug-Debian: https://bugs.debian.org/955056
+Description: An upstream comment says common.py:lazy_property is the problem item, 
+ and excluding that from the documentation does make Sphinx succeed (I 
+ haven't tested a whole build):
+ .
+ This is obviously not an ideal fix, but it's an internal class with little
+ documentation to begin with: https://snakemake.readthedocs.io/en/stable/api_reference/internal/snakemake.html#snakemake.common.lazy_property
+
+--- a/docs/conf.py
++++ b/docs/conf.py
+@@ -107,6 +107,8 @@ pygments_style = 'sphinx'
+ # If true, keep warnings as "system message" paragraphs in the built documents.
+ #keep_warnings = False
+ 
++# skip internal class that Sphinx 2 can't process (#296)
++autodoc_default_options = {'exclude-members': 'lazy_property'}
+ 
+ # -- Options for HTML output ----------------------------------------------
+ 



View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/caead8780e5149207dd9a62053f960d6080b73ae...13a15261cc8ba2b641dcfaf1410a298f60d5f496

-- 
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/caead8780e5149207dd9a62053f960d6080b73ae...13a15261cc8ba2b641dcfaf1410a298f60d5f496
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