[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Tue Apr 14 02:44:43 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
1f90c6b6 by Andreas Tille at 2020-04-14T01:44:39+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 13 Apr 2020 13:42:03 +0000
+Last-Update: Tue, 14 Apr 2020 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------


=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
+Last-Update: Tue, 14 Apr 2020 01:42:04 +0000
 
  source                        |             version             |        upstream_version         |                      uploaders                                            | Last uploader        |     Last uploaded      
 -------------------------------+---------------------------------+---------------------------------+---------------------------------------------------------------------------+----------------------+------------------------
@@ -15,7 +15,6 @@ Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
  discosnp                      | 2.4.3                           | 4.4.4                           | Andreas Tille,Olivier Sallou                                              | Andreas Tille        | 2020-01-27 15:19:13+00
  elastix                       | 4.9.0                           | 5.0.0                           | Gert Wollny,Steve M. Robbins                                              | Andreas Tille        | 2019-01-15 11:50:11+00
  fis-gtm                       | 6.3-007                         | 6.3-010                         | Amul Shah,Andreas Tille                                                   | Amul Shah            | 2019-02-28 14:12:19+00
- gatb-core                     | 1.4.1+git20191209.9398f28       | 1.4.1+git20200412.99f573a       | Andreas Tille,Nadiya Sitdykova                                            | Michael R. Crusoe    | 2020-02-17 14:52:30+00
  hdmf                          | 1.5.4                           | 1.6.1                           | Yaroslav Halchenko                                                        | Yaroslav Halchenko   | 2020-02-03 03:01:25+00
  htseq                         | 0.11.3                          | 0.11.4                          | Andreas Tille,Diane Trout                                                 | Diane Trout          | 2020-03-04 07:04:25+00
  hyphy                         | 2.5.1                           | 2.5.8                           | Andreas Tille                                                             | Andreas Tille        | 2020-01-07 21:19:50+00
@@ -57,12 +56,10 @@ Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
  q2-demux                      | 2019.10.0                       | 2020.2.0                        | Liubov Chuprikova                                                         | Liubov Chuprikova    | 2020-01-26 07:34:40+00
  q2templates                   | 2019.10.0                       | 2020.2.0                        | Liubov Chuprikova                                                         | Liubov Chuprikova    | 2019-11-14 22:00:17+00
  qiime                         | 2019.10.0                       | 2020.2.0                        | Andreas Tille,Liubov Chuprikova,Steffen Moeller                           | Liubov Chuprikova    | 2019-12-16 09:51:27+00
- racon                         | 1.4.10                          | 1.4.13                          | Andreas Tille,Cédric Lood                                                | Michael R. Crusoe    | 2019-11-12 17:22:24+00
  relion                        | 1.4                             | 3.0.8                           | Andreas Tille,Goswin von Brederlow,Navid Fehrenbacher,Roland Fehrenbacher | Andreas Tille        | 2018-06-14 12:49:40+00
  resfinder-db                  | 0.0+git20191001.149209d         | 0.0+git20200408.0322c0d         | Andreas Tille                                                             | Andreas Tille        | 2019-11-16 23:00:12+00
  salmon                        | 0.12.0                          | 1.2.0                           | Kevin Murray,Michael R. Crusoe                                            | Andreas Tille        | 2018-12-13 19:05:56+00
  seaview                       | 4.7                             | 5.0.2                           | Andreas Tille,Charles Plessy                                              | Andreas Tille        | 2018-05-09 13:43:40+00
- simde                         | 0.0.0.git.20200402              | 0.0.0.git.20200410              | Michael R. Crusoe                                                         | Michael R. Crusoe    | 2020-04-12 16:00:10+00
  simpleitk                     | 1.0.1                           | 1.2.0                           | Ghislain Antony Vaillant                                                  | Andreas Tille        | 2019-01-30 10:06:08+00
  snakemake                     | 5.10.0                          | 5.14.0                          | Kevin Murray                                                              | Andreas Tille        | 2020-04-09 09:34:37+00
  spades                        | 3.13.1                          | 3.14.0                          | Alexandre Mestiashvili,Andreas Tille,Michael R. Crusoe,Sascha Steinbiss   | Andreas Tille        | 2019-11-22 10:05:04+00
@@ -72,7 +69,7 @@ Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
  unanimity                     | 3.3.0                           | 4.2.0-1                         | Afif Elghraoui,Andreas Tille                                              | Adrian Bunk          | 2019-02-06 07:34:42+00
  vsearch                       | 2.14.1                          | 2.14.2                          | Andreas Tille,Tim Booth                                                   | Andreas Tille        | 2019-12-17 10:07:09+00
  xmedcon                       | 0.16.1                          | 0.16.2                          | Andreas Tille,Roland Marcus Rutschmann                                    | Andreas Tille        | 2019-01-25 18:23:59+00
-(70 rows)
+(67 rows)
 
 
  source                        |   id   | severity  |                                                                                               title                                                                                               
@@ -175,7 +172,6 @@ Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
  medicalterms                  | 602423 | important | hunspell-de-med: german dictionary unusable
  mencal                        | 607008 | normal    | mencal: with l10n, calendar header formatting not aligned with column content
  metaphlan2-data               | 839925 | important | metaphlan2-data: postinst deletes shipped file: /var/lib/metaphlan2-data/markers.fasta
- minimap2                      | 956136 | serious   | "-flto flag breaks nanopolish"
  mipe                          | 890788 | minor     | mipe: Please provide autopkgtest
  mriconvert                    | 617342 | normal    | 32-bit multiframe image conversion ignores frames
  ncbi-blast+                   | 891197 | normal    | Please switch to pcre2
@@ -244,6 +240,7 @@ Last-Update: Mon, 13 Apr 2020 13:42:04 +0000
  seqan2                        | 892222 | normal    | seqan2: FTBFS on hppa: app_test_seqan_tcoffee fails on 2trx.mlcs.fasta
  seqan2                        | 917851 | important | seqan2 2.4.0+dfsg-9: FTBFS, alignment problem
  seqsero                       | 955648 | serious   | seqsero: FTBFS: build-dependency not installable: sra-toolkit
+ sibelia                       | 956575 | serious   | sibelia: binary-all FTBFS
  sight                         | 954711 | wishlist  | FTBFS with Boost 1.71
  simka                         | 954273 | important | simka: arm64 autopkgtest time out
  simpleitk                     | 949355 | serious   | simpleitk FTBFS: test failures



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1f90c6b6508155e6eead7ec8d5e0da9a8a6125ae

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1f90c6b6508155e6eead7ec8d5e0da9a8a6125ae
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200414/ccd0396f/attachment-0001.html>


More information about the debian-med-commit mailing list