[med-svn] [Git][med-team/t-coffee][master] 12 commits: Standards-Version: 4.5.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / t-coffee


Commits:
56fdece9 by Andreas Tille at 2020-04-15T22:08:10+02:00
Standards-Version: 4.5.0

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4e38a4a5 by Andreas Tille at 2020-04-15T22:08:33+02:00
routine-update: New upstream version

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78500fa6 by Andreas Tille at 2020-04-15T22:08:34+02:00
New upstream version 13.41.0.28bdc39
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d7ee8edc by Andreas Tille at 2020-04-15T22:09:21+02:00
Update upstream source from tag 'upstream/13.41.0.28bdc39'

Update to upstream version '13.41.0.28bdc39'
with Debian dir ad2aa628aa1a8731b5f2b72e919967117cf197fe
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b8c25e2f by Andreas Tille at 2020-04-15T22:25:08+02:00
Adapt patches

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8a53d839 by Andreas Tille at 2020-04-15T22:26:19+02:00
routine-update: Add salsa-ci file

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f0d8cdf5 by Andreas Tille at 2020-04-15T22:26:19+02:00
routine-update: Rules-Requires-Root: no

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f3651d46 by Andreas Tille at 2020-04-15T22:26:20+02:00
Trim trailing whitespace.

Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html

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8b18f97a by Andreas Tille at 2020-04-15T22:26:21+02:00
Remove duplicate line from changelog.
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c6ee3fe0 by Andreas Tille at 2020-04-15T22:26:25+02:00
Remove unnecessary Team Upload line in changelog.

Fixes: lintian: unnecessary-team-upload
See-also: https://lintian.debian.org/tags/unnecessary-team-upload.html

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4f58d945 by Andreas Tille at 2020-04-15T22:26:25+02:00
Set fields Upstream-Name, Upstream-Contact in debian/copyright.
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c2aee3ee by Andreas Tille at 2020-04-15T22:26:27+02:00
Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).
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26 changed files:

- + README
- bin/linux/t_coffee
- debian/changelog
- debian/control
- debian/copyright
- debian/patches/clustalw2.patch
- debian/patches/fix_tempfile_name_sharing.patch
- debian/patches/mayhem.patch
- debian/patches/ncbi-blast++_has_dropped_pl_extension.patch
- debian/patches/set_proper_dir_permissions.patch
- + debian/salsa-ci.yml
- debian/upstream/metadata
- + doc/html/_sources/doc2test.rst.txt
- + doc/html/_sources/index.rst.txt
- + doc/html/_sources/page-example.rst.txt
- + doc/html/_sources/tcoffee_citations_references.rst.txt
- + doc/html/_sources/tcoffee_contacts_adresses.rst.txt
- + doc/html/_sources/tcoffee_doctest.rst.txt
- + doc/html/_sources/tcoffee_documentation_validation.rst.txt
- + doc/html/_sources/tcoffee_faq.rst.txt
- + doc/html/_sources/tcoffee_installation.rst.txt
- + doc/html/_sources/tcoffee_license.rst.txt
- + doc/html/_sources/tcoffee_main_documentation.rst.txt
- + doc/html/_sources/tcoffee_quickstart.rst.txt
- + doc/html/_sources/tcoffee_quickstart_regressive.rst.txt
- + doc/html/_sources/tcoffee_release_notes.rst.txt


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/t-coffee/-/compare/b08584fc50493359ab66486a7825c904e6854ad7...c2aee3eedc05bcc2dc3ac06cea52fa3e34305cca

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View it on GitLab: https://salsa.debian.org/med-team/t-coffee/-/compare/b08584fc50493359ab66486a7825c904e6854ad7...c2aee3eedc05bcc2dc3ac06cea52fa3e34305cca
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