[med-svn] [Git][med-team/python-nanoget][master] 2 commits: Adjust Build-Depends
Andreas Tille
gitlab at salsa.debian.org
Sat Apr 25 07:34:34 BST 2020
Andreas Tille pushed to branch master at Debian Med / python-nanoget
Commits:
3226e4e8 by Andreas Tille at 2020-04-24T17:34:41+02:00
Adjust Build-Depends
- - - - -
af848897 by Andreas Tille at 2020-04-25T08:32:24+02:00
Add example data and autopkgtest
- - - - -
12 changed files:
- debian/control
- + debian/missing-source/nanotest/README.md
- + debian/missing-source/nanotest/alignment.bam
- + debian/missing-source/nanotest/alignment.bam.bai_orig
- + debian/missing-source/nanotest/reads.fa.gz
- + debian/missing-source/nanotest/reads.fastq.gz
- + debian/missing-source/nanotest/sequencing_summary.txt
- + debian/python3-nanoget-examples.install
- + debian/python3-nanoget.install
- debian/rules
- + debian/source/include-binaries
- debian/tests/run-unit-test
Changes:
=====================================
debian/control
=====================================
@@ -7,6 +7,9 @@ Build-Depends: debhelper-compat (= 12),
dh-python,
python3,
python3-setuptools,
+ python3-biopython,
+ python3-nanomath,
+ python3-pysam
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/python-nanoget
Vcs-Git: https://salsa.debian.org/med-team/python-nanoget.git
@@ -17,8 +20,6 @@ Architecture: all
Section: python
Depends: ${python3:Depends},
${misc:Depends},
- python3-pandas,
- python3-numpy,
python3-biopython,
python3-pysam,
python3-nanomath
@@ -39,3 +40,28 @@ Description: extract information from Oxford Nanopore sequencing data and alignm
returned as a pandas DataFrame with standardized headernames for
convenient extraction. The functions perform logging while being called
and extracting data.
+
+Package: python3-nanoget-examples
+Architecture: all
+Section: python
+Depends: ${misc:Depends},
+Enhances: python3-nanoget
+Description: example data for python3-nanoget (dealing with Oxford Nanopore data)
+ The Python3 module nanoget provides functions to extract useful metrics
+ from Oxford Nanopore sequencing reads and alignments.
+ .
+ Data can be presented in the following formats, using the following functions:
+ .
+ * sorted bam file process_bam(bamfile, threads)
+ * standard fastq file process_fastq_plain(fastqfile, 'threads')
+ * fastq file with metadata from MinKNOW or Albacore
+ process_fastq_rich(fastqfile)
+ * sequencing_summary file generated by Albacore
+ process_summary(sequencing_summary.txt, 'readtype')
+ .
+ Fastq files can be compressed using gzip, bzip2 or bgzip. The data is
+ returned as a pandas DataFrame with standardized headernames for
+ convenient extraction. The functions perform logging while being called
+ and extracting data.
+ .
+ This package just contains an example script and the data to run the example.
=====================================
debian/missing-source/nanotest/README.md
=====================================
@@ -0,0 +1,10 @@
+# nanotest
+Small test datasets for testing nanopack scripts and modules
+
+This repo contains:
+- 371 reads from [ultra long e.coli reads from Josh Quick](http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/)
+- an alignment in bam format of 1000 reads from [SRR5665597](http://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000132) to the reference genome (using minimap2)
+- an alignment in cram format of 1000 reads from [SRR5665597](http://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000132) to the reference genome (using minimap2)
+- an albacore summary file of 371 the reads from the fastq file
+- a pickle file of a pandas DataFrame created after feature extraction using [nanoget](https://github.com/wdecoster/nanoget) from the summary file
+- a pickle file of a pandas DataFrame created after feature extraction using [nanoget](https://github.com/wdecoster/nanoget) from the bam file
=====================================
debian/missing-source/nanotest/alignment.bam
=====================================
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debian/missing-source/nanotest/alignment.bam.bai_orig
=====================================
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debian/missing-source/nanotest/reads.fa.gz
=====================================
Binary files /dev/null and b/debian/missing-source/nanotest/reads.fa.gz differ
=====================================
debian/missing-source/nanotest/reads.fastq.gz
=====================================
Binary files /dev/null and b/debian/missing-source/nanotest/reads.fastq.gz differ
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debian/missing-source/nanotest/sequencing_summary.txt
=====================================
@@ -0,0 +1,372 @@
+filename read_id run_id channel start_time duration num_events passes_filtering template_start num_events_template template_duration num_called_template sequence_length_template mean_qscore_template strand_score_template
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read148_strand.fast5 170fb1c5-979b-4df7-864f-c5c14689a14c b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 3733.02575 22.56375 12875 True 0.031 12875 22.53275 12875 8242 10.049 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch320_read27_strand.fast5 6d0956c2-c161-48f4-b2fa-142ca872406f b5e83402e47ea9927694cb6e80d61180dfc8a49a 320 1826.8425 123.37625 34771 True 62.52675 34771 60.8495 34771 16881 11.164 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch496_read2_strand.fast5 e9a32f7d-4aa6-4b85-9f76-6764769ad99c b5e83402e47ea9927694cb6e80d61180dfc8a49a 496 7.1315 121.414 52102 True 30.235 52102 91.179 52102 19346 9.822 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch485_read15_strand.fast5 b01da059-de21-4ed3-9eb8-6126ea59cb00 b5e83402e47ea9927694cb6e80d61180dfc8a49a 485 2586.54825 107.53375 36399 True 43.834 36399 63.69975 36399 19861 10.17 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch362_read219_strand.fast5 4d253e4f-2090-4adb-aa3e-16dc5e4d5e55 b5e83402e47ea9927694cb6e80d61180dfc8a49a 362 2720.77225 14.9615 2577 True 10.45175 2577 4.50975 2577 1672 12.663 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch163_read69_strand.fast5 4629b40a-aea4-4c92-9458-0e66ef4ecc17 b5e83402e47ea9927694cb6e80d61180dfc8a49a 163 673.69725 185.45225 95287 True 18.699 95287 166.75325 95287 59133 9.573 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch502_read25_strand.fast5 a8785b36-b442-4de7-9e43-5ddae6e39fdb b5e83402e47ea9927694cb6e80d61180dfc8a49a 502 884.39875 187.91175 83750 True 41.3485 83750 146.56325 83750 55323 11.985 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read19_strand.fast5 436405ef-1e7d-43a5-99b4-929e31897043 b5e83402e47ea9927694cb6e80d61180dfc8a49a 355 571.15325 94.5895 11586 True 74.31375 11586 20.27575 11586 7636 11.865 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch240_read291_strand.fast5 f31d3457-2065-4acf-a9d5-966a4818564c b5e83402e47ea9927694cb6e80d61180dfc8a49a 240 3511.1415 57.23625 19778 True 22.62325 19778 34.613 19778 6176 8.535 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read242_strand.fast5 d67b506a-b026-450d-803e-1e12bd1facaa b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 6315.02775 53.26525 8709 True 38.023 8709 15.24225 8709 5765 12.3 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch217_read62_strand.fast5 68a01ec4-bf8f-4aa4-8763-39cd9a15b8aa b5e83402e47ea9927694cb6e80d61180dfc8a49a 217 3506.43875 16.38525 2944 True 11.23225 2944 5.153 2944 2011 9.229 -0.0007
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch321_read18_strand.fast5 63fcec17-46fd-4cdc-a381-7b09d6f652e9 b5e83402e47ea9927694cb6e80d61180dfc8a49a 321 820.995 47.1295 25668 True 2.21 25668 44.9195 25668 17575 12.18 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch235_read49_strand.fast5 45eb23a8-63d1-4870-9a31-c349836cc728 b5e83402e47ea9927694cb6e80d61180dfc8a49a 235 3662.59625 250.6945 122186 True 36.86825 122186 213.82625 122186 20295 8.707 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch150_read334_strand.fast5 1b05de41-d66d-4947-8533-c27bdafeee69 b5e83402e47ea9927694cb6e80d61180dfc8a49a 150 4017.1535 183.56 97579 True 12.79625 97579 170.76375 97579 61111 9.709 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch5_read33_strand.fast5 b5b5833b-9341-4886-9ffd-7dd7f876c009 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 5 142.765 25.96625 9812 True 8.79475 9812 17.1715 9812 225 7.694 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch438_read26_strand.fast5 76a5b578-7c92-458b-9981-437f48b82455 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 438 160.71825 55.85775 31896 True 0.03975 31896 55.818 31896 21845 10.004 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch450_read2842_strand.fast5 26cfa987-1a6d-4137-b4b7-19f84f990bfc 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 450 362.60825 76.74075 43851 True 0.0 43851 76.74075 43851 29248 10.348 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch151_read88_strand.fast5 6e2f5cdb-c978-4403-9611-4faaa35722f8 a3f8b1fb56e77905d115a86ef283e1f838d7476d 151 184.193 8.241 4709 True 0.0 4709 8.241 4709 2638 10.235 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch402_read37_strand.fast5 32762878-4ef4-4f27-bfcd-5fe902fb6497 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 402 250.694 77.26225 25086 True 33.3605 25086 43.90175 25086 16574 11.969 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch206_read39_strand.fast5 d52c84b1-7a31-4639-b41e-cf5847681395 a3f8b1fb56e77905d115a86ef283e1f838d7476d 206 164.9445 36.5865 20906 True 0.0 20906 36.5865 20906 10700 7.348 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch174_read239_strand.fast5 c61d655a-fa49-4376-a266-d1710fffdc60 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 174 140.031 20.596 11726 True 0.07425 11726 20.52175 11726 5285 7.139 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch240_read28_strand.fast5 e32e01c1-79ad-4436-96a6-afb4414bccab a3f8b1fb56e77905d115a86ef283e1f838d7476d 240 96.7155 34.78475 3500 True 28.65875 3500 6.126 3500 2284 11.446 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch461_read3_strand.fast5 d7c4f400-faf1-4574-933c-14cfe563ecdb a3f8b1fb56e77905d115a86ef283e1f838d7476d 461 22.223 40.1695 1803 True 37.0135 1803 3.156 1803 1216 11.478 -0.0006
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch142_read28_strand.fast5 0a779938-c2f0-4fe9-937b-19b8172322b3 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 142 152.8475 63.728 36416 True 0.0 36416 63.728 36416 22419 10.38 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch220_read62_strand.fast5 53d223e3-8341-4fb2-82a9-534b29d917f0 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 220 250.694 22.03525 10606 True 3.47325 10606 18.562 10606 7053 12.447 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch17_read37_strand.fast5 6cd9b908-7d7c-4df2-887b-557631f4ecc4 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 17 320.315 7.64125 4343 True 0.04025 4343 7.601 4343 1726 10.341 -0.0005
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch119_read68_strand.fast5 c1050d07-d676-4f09-bb50-5af9a0d36719 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 119 274.408 2.05275 1157 True 0.02775 1157 2.025 1157 804 11.135 -0.0024
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch260_read26_strand.fast5 e681ea0c-485a-4170-bb87-13e86878f0d5 a3f8b1fb56e77905d115a86ef283e1f838d7476d 260 280.141 2.97125 1281 True 0.728 1281 2.24325 1281 750 7.439 -0.0013
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch427_read24_strand.fast5 e4208eb0-c817-4512-a0d6-3472748d09a3 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 427 125.59 12.975 7397 True 0.02925 7397 12.94575 7397 4747 12.276 -0.0001
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch507_read3_strand.fast5 cd6e4550-22d9-49e5-8d4a-dc2d54eb78b9 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 507 22.127 64.9935 23188 True 24.41425 23188 40.57925 23188 5082 10.188 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch144_read32_strand.fast5 1ba73b61-7f74-46ce-acbe-643b8946ee07 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 144 147.0335 4.7515 2698 True 0.0285 2698 4.723 2698 1895 10.679 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch222_read21_strand.fast5 a045f9b2-93dd-467f-a7d9-ceb6d72a4f67 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 222 130.9055 1.071 612 True 0.0 612 1.071 612 392 7.268 -0.0036
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch363_read164_strand.fast5 49e5d9e0-b87d-4bb2-867b-fbc6a321bcf8 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 363 431.1165 8.23225 4674 True 0.05125 4674 8.181 4674 3212 11.092 -0.0001
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch170_read40_strand.fast5 7d15ba0b-67c8-4307-961e-5ddeb79b1056 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 170 232.9605 17.50725 9980 True 0.0415 9980 17.46575 9980 5658 10.647 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch410_read30_strand.fast5 a7fc1f72-648d-471e-87f9-e2186b246627 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 410 141.0205 5.52325 3140 True 0.02725 3140 5.496 3140 1913 11.971 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch349_read69_strand.fast5 17df9262-7bf6-4711-bc7d-a0569f473cd3 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 349 307.5495 20.40675 11647 True 0.02425 11647 20.3825 11647 7829 12.098 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch10_read65_strand.fast5 1bc8d128-eed3-41c2-baea-3ca8cd9f0dc9 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 10 250.694 35.269 9451 True 18.72825 9451 16.54075 9451 6468 10.704 -0.0002
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+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch507_read7_strand.fast5 94b3ba2e-2cc3-4a7c-a319-9b1bf976aeff 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 507 98.27225 5.3885 3073 True 0.01025 3073 5.37825 3073 1819 10.48 -0.0006
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch170_read42_strand.fast5 3eec21b1-872f-480b-8d11-daa41209338b 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 170 250.694 77.2625 44150 True 0.0 44150 77.2625 44150 24787 11.046 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch212_read68_strand.fast5 778f7330-179c-42f3-bdfe-f7c5ccddea01 a3f8b1fb56e77905d115a86ef283e1f838d7476d 212 164.93525 36.59575 20911 True 0.0 20911 36.59575 20911 14734 11.492 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch406_read32_strand.fast5 1592d38b-2bec-4892-8021-1a51507c6327 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 406 250.69425 77.26175 35190 True 15.6785 35190 61.58325 35190 19989 8.682 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch226_read66_strand.fast5 5f428477-799c-443a-986f-2ebd5b84ab18 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 226 351.44525 10.95275 6253 True 0.00925 6253 10.9435 6253 3877 11.287 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read39_strand.fast5 890ec449-f329-40c8-9e57-f4eb2c358b4c 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 275 250.69425 8.092 4624 True 0.0 4624 8.092 4624 3122 12.351 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch466_read71_strand.fast5 db1765d2-0daa-4154-9a6d-6aed0cb13803 a3f8b1fb56e77905d115a86ef283e1f838d7476d 466 217.31975 17.3305 7267 True 4.6125 7267 12.718 7267 4838 11.926 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch212_read32_strand.fast5 56ab6b26-7b8f-4447-93b8-331d2dea9a99 a3f8b1fb56e77905d115a86ef283e1f838d7476d 212 94.6505 1.855 1048 True 0.02075 1048 1.83425 1048 759 12.249 -0.0014
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch39_read42_strand.fast5 c5fac5cc-6617-4198-baaa-b5ed9d66d47a 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 39 122.2395 16.3085 9274 True 0.07825 9274 16.23025 9274 6217 10.86 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch262_read61_strand.fast5 2792a316-2e64-473b-a6ee-6ca6936e0341 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 262 343.64325 18.75475 5528 True 9.08025 5528 9.6745 5528 3484 11.555 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch480_read37_strand.fast5 57fae1d4-129e-4727-8118-251592a0fe4f 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 480 172.993 43.58275 24904 True 0.0 24904 43.58275 24904 16717 12.421 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch128_read57_strand.fast5 62ca0491-c0e0-42bc-a46a-031f9e6d2eac 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 128 417.494 16.065 4591 True 8.02925 4591 8.03575 4591 3108 9.95 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch508_read5_strand.fast5 dbb53601-02ec-42af-8d67-9603d8d5f938 a3f8b1fb56e77905d115a86ef283e1f838d7476d 508 54.844 7.549 4303 True 0.01725 4303 7.53175 4303 2680 10.605 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch258_read60_strand.fast5 e058bacf-e2d4-4503-81f3-57cb5e5b276a 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 258 254.314 14.529 8295 True 0.01225 8295 14.51675 8295 5692 11.466 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch78_read66_strand.fast5 c850a9b9-0ace-4be9-9034-e300580f6794 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 78 383.25175 36.819 21039 True 0.0 21039 36.819 21039 12068 9.109 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch76_read30_strand.fast5 4eb96854-c4a5-44eb-b96e-aaa2e750b700 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 76 183.23875 33.33675 19049 True 0.0 19049 33.33675 19049 11198 10.304 -0.0001
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch41_read54_strand.fast5 0c093a62-ee3a-4d13-bd9c-17ba68494f0b 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 41 362.6085 76.7405 8471 True 61.916 8471 14.8245 8471 5551 10.405 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch218_read94_strand.fast5 7ff49798-84f1-4be9-b587-e8fcafc085e2 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 218 383.19025 56.1585 22996 True 15.9155 22996 40.243 22996 15222 9.896 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch237_read55_strand.fast5 e9e62110-ceff-4d6d-82ee-650a6f3b0af0 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 237 362.6085 76.736 43849 True 0.0 43849 76.736 43849 27411 9.329 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch158_read35_strand.fast5 55c33490-3203-4af4-9b9a-768ce2384cc6 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 158 157.773 26.88 5356 True 17.5065 5356 9.3735 5356 3712 11.944 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch342_read31_strand.fast5 78c80974-17a2-439e-a3bf-ed78a5fd6233 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 342 138.7805 77.795 44454 True 0.0 44454 77.795 44454 23421 10.589 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch214_read43_strand.fast5 87bb9f4d-3a78-4762-9d98-b9c82f6954da 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 214 353.3395 9.0585 5176 True 0.0 5176 9.0585 5176 3158 10.322 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch342_read29_strand.fast5 860f733a-6740-4b7b-8fa9-255b4ff1fb29 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 342 119.32725 19.241 3521 True 13.07925 3521 6.16175 3521 2430 9.64 -0.0005
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch82_read32_strand.fast5 ef8efd26-c10b-47c6-ba83-ad8292f7800b 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 82 165.94225 50.63375 28851 True 0.1435 28851 50.49025 28851 17892 11.151 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch143_read36_strand.fast5 e7657dc6-842c-4d94-b289-a60070596261 a3f8b1fb56e77905d115a86ef283e1f838d7476d 143 164.9415 36.5895 20908 True 0.0 20908 36.5895 20908 14531 12.264 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch361_read13_strand.fast5 19a10b91-eb2c-4ef5-af00-11ac5248eed8 a3f8b1fb56e77905d115a86ef283e1f838d7476d 361 164.94025 36.597 12510 True 14.7035 12510 21.8935 12510 8545 10.664 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch258_read62_strand.fast5 20fe2b80-92f4-432f-8c93-877de4a8eb99 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 258 274.365 8.62275 4917 True 0.01775 4917 8.605 4917 3503 10.626 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch149_read45_strand.fast5 d000b532-d08b-46d8-86ff-894e91d6d012 a3f8b1fb56e77905d115a86ef283e1f838d7476d 149 217.3105 17.336 7009 True 5.07025 7009 12.26575 7009 4673 10.426 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch104_read29_strand.fast5 3167daed-4f10-4549-821d-9a2e432511fd 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 104 127.955 10.60575 6060 True 0.0 6060 10.60575 6060 3997 10.236 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch384_read27_strand.fast5 090a83a5-7154-42ca-b7a3-6f7537cfcb5b 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 384 140.9315 45.827 26160 True 0.0465 26160 45.7805 26160 17827 11.2 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch427_read26_strand.fast5 39377d80-2227-44fb-b57b-67dd25579b63 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 427 138.7865 14.948 8541 True 0.0 8541 14.948 8541 5678 11.992 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch196_read33_strand.fast5 777d0624-85dc-4492-abd2-67a7f1c62175 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 196 237.524 12.94375 7043 True 0.617 7043 12.32675 7043 1919 7.232 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch81_read3_strand.fast5 35e3d195-c3a9-46b8-b15c-40b1531c9831 a3f8b1fb56e77905d115a86ef283e1f838d7476d 81 22.223 40.1695 11088 True 20.7655 11088 19.404 11088 6730 8.685 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch108_read27_strand.fast5 4aa362e0-fb22-4b01-9df2-763219cf14d3 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 108 138.78075 77.79475 43525 True 1.62525 43525 76.1695 43525 28250 10.58 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch510_read29_strand.fast5 a0240538-c678-463e-9102-738cf6ccd4ef 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 510 119.33975 19.2285 3999 True 12.23025 3999 6.99825 3999 2587 9.604 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch194_read64_strand.fast5 1d349f09-7798-491c-aafa-e8306cbb035e a3f8b1fb56e77905d115a86ef283e1f838d7476d 194 164.937 36.594 10601 True 18.04075 10601 18.55325 10601 6192 9.318 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch341_read26_strand.fast5 266f3057-7d66-433f-bc90-e6288f2eea60 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 341 210.437 6.134 3505 True 0.0 3505 6.134 3505 2247 12.58 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch143_read33_strand.fast5 78e444cb-bc62-4bfa-a396-18e42850a1a9 a3f8b1fb56e77905d115a86ef283e1f838d7476d 143 147.26175 17.43675 1307 True 15.1495 1307 2.28725 1307 916 12.317 -0.0016
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch333_read166_strand.fast5 50470a53-badf-47e4-9bbf-64b2bfdd2f17 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 333 425.84975 13.49925 7664 True 0.0865 7664 13.41275 7664 5132 9.941 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch210_read66_strand.fast5 68b728f4-5ea6-447a-9c9a-4081ec4300ba 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 210 362.60825 76.7405 31952 True 20.82425 31952 55.91625 31952 19584 10.909 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch82_read35_strand.fast5 230d83b6-4aa5-4cd7-bdbc-e564f62cd461 a3f8b1fb56e77905d115a86ef283e1f838d7476d 82 147.267 17.43875 4755 True 9.11625 4755 8.3225 4755 3157 8.561 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch226_read68_strand.fast5 86afb306-f51f-4174-abd0-2d09c06ae7d6 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 226 362.60825 76.7405 43851 True 0.0 43851 76.7405 43851 26677 11.533 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read36_strand.fast5 9b5ab24e-9b25-42a1-8bc2-82ee39d7057e 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 275 242.3305 8.13725 4640 True 0.01575 4640 8.1215 4640 3125 12.209 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch509_read59_strand.fast5 cae89adc-7185-4485-9b22-1b0364129989 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 509 362.6085 44.72325 25556 True 0.0 25556 44.72325 25556 15775 10.607 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch32_read44_strand.fast5 54ad2d30-0f03-4249-bdd1-fa2273802bd2 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 32 289.51725 38.43925 21930 True 0.06175 21930 38.3775 21930 14665 11.967 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch379_read41_strand.fast5 cbbc02a9-efa7-4ed4-a073-40a01afbf0df 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 379 362.60875 76.74 17377 True 46.32925 17377 30.41075 17377 10896 8.852 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch472_read31_strand.fast5 7f8978fe-5931-43ae-b34c-76dc3b0fcad0 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 472 232.259 18.209 5796 True 8.066 5796 10.143 5796 3609 9.541 -0.0004
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch321_read27_strand.fast5 eeb937a9-f150-43cd-9c92-9148ebf8c827 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 321 138.78075 75.32375 37675 True 9.39225 37675 65.9315 37675 24566 10.77 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch162_read31_strand.fast5 a2602315-76be-485a-aa4b-f485e880e99d 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 162 119.33825 19.226 4504 True 11.343 4504 7.883 4504 2527 7.495 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch151_read23_strand.fast5 2870d465-ac8c-46d9-ba88-843c4cac5292 a3f8b1fb56e77905d115a86ef283e1f838d7476d 151 164.93175 15.80575 9031 True 0.0 9031 15.80575 9031 6030 10.901 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch7_read73_strand.fast5 aa26b7da-fba6-4e91-9714-aba2fbe59218 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 7 295.353 21.82025 10218 True 3.93775 10218 17.8825 10218 5331 7.388 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch14_read32_strand.fast5 8fa6c937-0e5b-4375-993c-24116207dfbc 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 14 250.694 77.26225 28289 True 27.7555 28289 49.50675 28289 7689 10.399 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch73_read46_strand.fast5 b690c30b-b325-421e-bef8-555a476d4981 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 73 416.19375 23.155 1346 True 20.79825 1346 2.35675 1346 821 7.758 -0.0011
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch214_read45_strand.fast5 fb98ce1c-e9f6-4f10-a823-e6e484aa8808 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 214 362.60825 58.70375 33545 True 0.0 33545 58.70375 33545 18771 10.207 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch384_read29_strand.fast5 db122386-830f-4f45-ad12-558bcd388ddf 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 384 204.22625 12.34975 7020 True 0.06375 7020 12.286 7020 4700 11.901 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch234_read61_strand.fast5 28040b6a-47f5-4651-ab72-4f9cb1202fb8 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 234 232.25925 18.2085 9586 True 1.43225 9586 16.77625 9586 6124 8.342 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read42_strand.fast5 a361b413-393d-4f48-ab9f-52f7f65f514a 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 275 261.50575 5.71125 3263 True 0.0 3263 5.71125 3263 2017 10.906 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch509_read57_strand.fast5 25cec62b-2816-4413-8f15-4bc151d1a95d 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 509 357.17575 5.2225 2973 True 0.01925 2973 5.20325 2973 1957 11.162 -0.0005
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch81_read48_strand.fast5 ec7e99c4-0ea3-4eb4-9365-c76edd376cd5 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 81 187.27325 9.82725 5591 True 0.043 5591 9.78425 5591 3652 10.391 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch52_read32_strand.fast5 46eb9dcf-08de-4a10-86ab-c3cac88974a0 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 52 232.259 18.20875 2888 True 13.15325 2888 5.0555 2888 1872 10.187 -0.0007
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch286_read62_strand.fast5 1e65a384-677a-40f8-83f4-ae91a0da697b 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 286 237.05575 13.412 7637 True 0.04575 7637 13.36625 7637 4825 8.592 -0.0003
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch172_read35_strand.fast5 2d32b7e0-d1e1-4599-82bc-356ffdfe75bf 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 172 146.066 57.581 32882 True 0.03725 32882 57.54375 32882 22812 11.596 -0.0001
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch104_read64_strand.fast5 60f664ec-9e53-4e59-9c61-6c677f9682f8 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 104 241.21625 1.663 950 True 0.0 950 1.663 950 552 7.088 -0.0024
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch172_read13_strand.fast5 cda9680f-3cac-4431-aef3-66e319444751 a3f8b1fb56e77905d115a86ef283e1f838d7476d 172 164.9385 36.5925 18188 True 4.76225 18188 31.83025 18188 11991 9.007 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch142_read62_strand.fast5 fe997c4d-ffed-42c9-a28f-d3d3ba298361 a3f8b1fb56e77905d115a86ef283e1f838d7476d 142 164.94575 36.58525 20905 True 0.0 20905 36.58525 20905 11880 9.707 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch89_read27_strand.fast5 39eadbd8-acc8-4751-857d-4b5554b8ca70 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 89 232.2595 18.20875 4310 True 10.66575 4310 7.543 4310 2832 11.134 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch10_read50_strand.fast5 a56078bb-cece-4929-a19b-501bddf5d903 a3f8b1fb56e77905d115a86ef283e1f838d7476d 10 164.936 36.59475 11989 True 15.6125 11989 20.98225 11989 7179 9.533 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch374_read37_strand.fast5 9e0013b4-48a2-4bcb-8674-88aabba1dd8c a3f8b1fb56e77905d115a86ef283e1f838d7476d 374 166.70875 34.82225 19870 True 0.04925 19870 34.773 19870 12927 8.966 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch144_read29_strand.fast5 41253824-9276-4c57-b286-5f59394c3bf3 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 144 138.7805 1.342 766 True 0.0 766 1.342 766 470 8.738 -0.0025
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch78_read63_strand.fast5 8a2a70a2-f032-4c81-a754-cdac8b442988 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 78 374.225 8.83 5037 True 0.01425 5037 8.81575 5037 3565 9.18 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch77_read19_strand.fast5 629c309d-cb48-41e7-8e32-59eab234bca6 a3f8b1fb56e77905d115a86ef283e1f838d7476d 77 78.179 18.32675 2596 True 13.783 2596 4.54375 2596 1753 9.939 -0.0006
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch160_read61_strand.fast5 362ce9e8-a39c-4663-b425-f27bdd091431 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 160 414.74875 24.59975 9682 True 7.656 9682 16.94375 9682 6333 13.288 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch218_read36_strand.fast5 dbdf6666-973d-483a-a73c-1b6a8d5ca4a9 a3f8b1fb56e77905d115a86ef283e1f838d7476d 218 159.33725 5.361 3048 True 0.02625 3048 5.33475 3048 1987 10.122 -0.0005
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch191_read35_strand.fast5 11101d35-375b-4ce8-818d-7c97990014d0 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 191 154.064 15.59 8908 True 0.0 8908 15.59 8908 6387 11.12 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read51_strand.fast5 c7cd7cf7-7cbd-4928-81de-93e7927f3687 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 275 297.33075 30.6255 17500 True 0.0 17500 30.6255 17500 12063 12.138 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch155_read23_strand.fast5 e551dd73-4c75-4465-937a-56cbb413ce5e 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 155 119.331 19.23325 2849 True 14.247 2849 4.98625 2849 1910 11.22 -0.0006
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch258_read63_strand.fast5 43f3b367-235a-4f29-bb58-b41355f3b8a8 a3f8b1fb56e77905d115a86ef283e1f838d7476d 258 155.871 8.8315 5012 True 0.05975 5012 8.77175 5012 3394 11.9 -0.0006
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch216_read30_strand.fast5 5c576265-6d59-417b-9a60-97cc70d59039 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 216 143.02225 18.701 10677 True 0.016 10677 18.685 10677 7029 12.168 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch117_read28_strand.fast5 0639b34e-093d-46aa-8e5a-5a7afce95072 a3f8b1fb56e77905d115a86ef283e1f838d7476d 117 164.93825 36.59275 20900 True 0.017 20900 36.57575 20900 12846 9.958 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch474_read26_strand.fast5 122b770d-de64-4a58-b1b3-c56e88341045 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 474 119.33825 19.23 8439 True 4.46125 8439 14.76875 8439 5554 10.669 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch478_read36_strand.fast5 162329e5-5f74-4677-b8cd-f2b2e094f520 a3f8b1fb56e77905d115a86ef283e1f838d7476d 478 147.2665 17.43275 1726 True 14.411 1726 3.02175 1726 1079 8.83 -0.0011
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch460_read40_strand.fast5 6ffdfd8c-33fc-4712-a9bc-ca2dcdccadbb 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 460 250.694 77.2625 18383 True 45.092 18383 32.1705 18383 10776 10.212 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch75_read38_strand.fast5 af3573e0-5cdb-46c7-b451-8cfc14f8ce4e a3f8b1fb56e77905d115a86ef283e1f838d7476d 75 87.518 8.97975 5113 True 0.032 5113 8.94775 5113 2566 7.273 -0.0002
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch7_read76_strand.fast5 74edd3c4-43a0-4613-b2d5-ee21389245ab 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 7 320.661 4.143 2367 True 0.0 2367 4.143 2367 1376 7.717 -0.0008
+nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch201_read63_strand.fast5 71946314-2f93-4708-b880-04e77b201918 9ff0fede59c6669aa7f0d860aa73a4f0959d4b99 201 351.683 10.7105 6120 True 0.0 6120 10.7105 6120 3235 11.68 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch77_read24_strand.fast5 25566b20-20f6-4ac8-9bb1-f607d8e0a155 a21aacee4115455d15f5783d4115ff1a5edc05c2 77 134.0755 78.73775 44993 True 0.0 44993 78.73775 44993 30305 10.134 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch41_read15_strand.fast5 207faef5-79f2-4d3a-acc0-68120f3ba8de a17eb30893af29b61a9da687a20b3b4df8cc40a1 41 103.4005 29.03325 16580 True 0.018 16580 29.01525 16580 11448 12.32 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch203_read19_strand.fast5 a07582da-22b8-40e9-935c-d9373603ad29 a17eb30893af29b61a9da687a20b3b4df8cc40a1 203 92.312 28.84725 13478 True 5.26075 13478 23.5865 13478 9497 11.978 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch341_read20_strand.fast5 e6dd696c-c153-48a2-8372-ddaef1357e3d a17eb30893af29b61a9da687a20b3b4df8cc40a1 341 95.983 36.44775 20470 True 0.625 20470 35.82275 20470 13798 12.265 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch371_read37_strand.fast5 4579af5a-b32a-413d-8b88-38025fa6c1af a21aacee4115455d15f5783d4115ff1a5edc05c2 371 247.618 72.67275 41527 True 0.0 41527 72.67275 41527 27834 12.919 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch181_read34_strand.fast5 b33e99a3-69fd-49e9-a66b-2dcda27d1413 a21aacee4115455d15f5783d4115ff1a5edc05c2 181 124.21925 9.634 5481 True 0.04225 5481 9.59175 5481 3844 10.219 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch180_read32_strand.fast5 97dcfa31-33ea-49c5-a49e-7938893d8fc4 a21aacee4115455d15f5783d4115ff1a5edc05c2 180 279.5005 17.30675 9875 True 0.02425 9875 17.2825 9875 3406 11.619 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch189_read20_strand.fast5 5d449104-e343-4512-969c-3a2a10bfb251 a17eb30893af29b61a9da687a20b3b4df8cc40a1 189 92.3105 40.1155 10262 True 22.1555 10262 17.96 10262 6558 9.573 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch217_read40_strand.fast5 7062c204-081c-4071-bd48-fb05db3ff62a a17eb30893af29b61a9da687a20b3b4df8cc40a1 217 168.4475 34.02875 15027 True 7.731 15027 26.29775 15027 8858 12.036 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch269_read14_strand.fast5 72e366f5-f8c8-454f-ac35-3fd301eb1a3d a17eb30893af29b61a9da687a20b3b4df8cc40a1 269 77.26225 18.72075 3152 True 13.20375 3152 5.517 3152 1892 9.282 -0.0007
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch473_read58_strand.fast5 2661b16d-4d94-4552-9804-69e509dcab0e a21aacee4115455d15f5783d4115ff1a5edc05c2 473 247.60275 57.613 32921 True 0.0 32921 57.613 32921 25101 8.154 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch485_read2_strand.fast5 6badc22a-d4c9-420a-9977-d7681e5d137a a17eb30893af29b61a9da687a20b3b4df8cc40a1 485 21.498 40.108 4608 True 32.04275 4608 8.06525 4608 3113 12.082 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch138_read5_strand.fast5 e1261168-6916-4c3c-956f-1d88bc6fcc4b a21aacee4115455d15f5783d4115ff1a5edc05c2 138 33.38625 67.51675 28562 True 17.5325 28562 49.98425 28562 16985 8.997 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch342_read21_strand.fast5 01b2583b-2a30-460f-9f8e-c9db19c822f8 a21aacee4115455d15f5783d4115ff1a5edc05c2 342 134.0685 78.74475 44997 True 0.0 44997 78.74475 44997 31535 11.152 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch1_read25_strand.fast5 db2a9cc3-a4cf-4313-8e04-e44b5ef2491c a17eb30893af29b61a9da687a20b3b4df8cc40a1 1 78.0215 17.75125 5447 True 8.2175 5447 9.53375 5447 2413 8.153 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch381_read48_strand.fast5 84da7953-3178-4b69-86d6-2d1ec7847692 a21aacee4115455d15f5783d4115ff1a5edc05c2 381 247.6005 39.614 22636 True 0.0 22636 39.614 22636 16074 10.254 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch250_read35_strand.fast5 53dc6a08-da49-4bb4-a33d-e65a6765be6b a21aacee4115455d15f5783d4115ff1a5edc05c2 250 228.568 18.83475 1533 True 16.152 1533 2.68275 1533 1009 7.386 -0.0013
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch160_read41_strand.fast5 bb914f49-16b8-407b-a41f-27aab50a96f8 a17eb30893af29b61a9da687a20b3b4df8cc40a1 160 218.312 18.1805 6213 True 7.30675 6213 10.87375 6213 4019 10.634 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch64_read31_strand.fast5 e902bd3d-c01f-4eea-9c0d-88499dc7edfa a21aacee4115455d15f5783d4115ff1a5edc05c2 64 238.03425 9.36675 5336 True 0.0285 5336 9.33825 5336 3619 10.521 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch82_read45_strand.fast5 7e5d1110-1fe0-49e7-828e-e189212a1ece a21aacee4115455d15f5783d4115ff1a5edc05c2 82 300.661 23.52975 13434 True 0.0195 13434 23.51025 13434 8109 11.272 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch79_read4_strand.fast5 356ca436-6b1b-4070-87bd-5b857915da72 a17eb30893af29b61a9da687a20b3b4df8cc40a1 79 31.17425 30.43175 17312 True 0.1345 17312 30.29725 17312 9063 8.18 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch131_read22_strand.fast5 02ace671-c52d-48fe-a504-1becd95a10dc a17eb30893af29b61a9da687a20b3b4df8cc40a1 131 123.082 9.351 4578 True 1.33925 4578 8.01175 4578 2877 8.931 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch458_read36_strand.fast5 12c5beea-f48b-4747-b79a-20607b941350 a21aacee4115455d15f5783d4115ff1a5edc05c2 458 228.568 18.82975 8695 True 3.6125 8695 15.21725 8695 5807 12.238 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch330_read28_strand.fast5 4446a2b3-ae9a-48bb-a1d4-71334a35b5c6 a17eb30893af29b61a9da687a20b3b4df8cc40a1 330 95.98275 36.451 20826 True 0.00525 20826 36.44575 20826 5838 10.999 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch333_read35_strand.fast5 965f0963-9027-4fb0-8ee9-ece73366bbdc a17eb30893af29b61a9da687a20b3b4df8cc40a1 333 95.983 36.4565 14752 True 10.639 14752 25.8175 14752 9425 9.145 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch474_read93_strand.fast5 84782427-e30e-4487-bd87-d283fbe5b8d1 a17eb30893af29b61a9da687a20b3b4df8cc40a1 474 218.32325 18.1605 3717 True 11.65425 3717 6.50625 3717 2351 11.853 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch41_read22_strand.fast5 6c017707-4b33-4c37-9ecf-c2516801ed50 a21aacee4115455d15f5783d4115ff1a5edc05c2 41 125.60875 8.2445 4692 True 0.03275 4692 8.21175 4692 2997 10.782 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch32_read18_strand.fast5 a05b41ad-6dc9-4484-9692-8af1bc037bfe a17eb30893af29b61a9da687a20b3b4df8cc40a1 32 77.262 55.1715 18235 True 23.26 18235 31.9115 18235 12485 10.105 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch485_read3_strand.fast5 ae277ee4-46c8-422c-9b90-c422cc376ce2 a21aacee4115455d15f5783d4115ff1a5edc05c2 485 22.27575 20.844 6081 True 10.20075 6081 10.64325 6081 4156 12.785 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch450_read29_strand.fast5 d5fd98a2-df8d-4e62-adb4-a69cf6ae7aa0 a17eb30893af29b61a9da687a20b3b4df8cc40a1 450 95.98275 36.45075 14384 True 11.27825 14384 25.1725 14384 9155 8.488 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch369_read22_strand.fast5 0f4cc15d-9338-41f4-8f6d-3a8a0efdd57b a17eb30893af29b61a9da687a20b3b4df8cc40a1 369 166.43875 36.0375 20592 True 0.0 20592 36.0375 20592 12968 10.211 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch428_read31_strand.fast5 a116c0bb-0ee0-401b-9174-cb575363d095 a21aacee4115455d15f5783d4115ff1a5edc05c2 428 228.5765 18.829 3212 True 13.207 3212 5.622 3212 2150 12.693 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch163_read19_strand.fast5 23f0e211-95a2-461f-92d6-5cb47e2a406c a17eb30893af29b61a9da687a20b3b4df8cc40a1 163 77.26225 55.163 27976 True 6.20375 27976 48.95925 27976 15088 10.591 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch262_read20_strand.fast5 b6cd690a-30fb-4812-8da8-186dd5c8a61d a21aacee4115455d15f5783d4115ff1a5edc05c2 262 203.2955 9.51775 5374 True 0.11325 5374 9.4045 5374 3726 10.756 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch381_read46_strand.fast5 24009b7b-1a6f-4482-881a-1d3f165a59b7 a21aacee4115455d15f5783d4115ff1a5edc05c2 381 236.32575 11.08 6331 True 0.0 6331 11.08 6331 4577 10.958 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch333_read83_strand.fast5 bb920c41-3a64-46fc-ab87-4abbc2fcaa5a a17eb30893af29b61a9da687a20b3b4df8cc40a1 333 236.70275 35.53325 16794 True 6.14375 16794 29.3895 16794 5117 9.03 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch362_read45_strand.fast5 cbe5bf7e-3a6a-42bc-84b2-f470e9c40024 a17eb30893af29b61a9da687a20b3b4df8cc40a1 362 218.312 53.924 20424 True 18.18075 20424 35.74325 20424 5511 10.354 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch193_read5_strand.fast5 940b784c-7e81-46ae-876b-64fd2e812694 a21aacee4115455d15f5783d4115ff1a5edc05c2 193 24.43725 22.7635 13001 True 0.01025 13001 22.75325 13001 6180 7.07 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch25_read27_strand.fast5 85b98079-f6d7-49bd-ae77-9e58af074989 a21aacee4115455d15f5783d4115ff1a5edc05c2 25 247.606 76.5845 43762 True 0.0 43762 76.5845 43762 28517 10.689 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch341_read51_strand.fast5 a06d379b-b40b-4746-9d11-1ddd398f9497 a21aacee4115455d15f5783d4115ff1a5edc05c2 341 231.94975 15.45325 7793 True 1.81425 7793 13.639 7793 4060 10.006 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch221_read4_strand.fast5 8c343e96-dffb-4df0-a769-8299f08a5e83 a21aacee4115455d15f5783d4115ff1a5edc05c2 221 22.27525 78.62725 38236 True 11.713 38236 66.91425 38236 24914 9.689 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch504_read21_strand.fast5 65e6e144-962e-4e7e-b42f-f33f9af39422 a17eb30893af29b61a9da687a20b3b4df8cc40a1 504 95.98275 36.45075 6245 True 25.52075 6245 10.93 6245 4114 8.948 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch342_read19_strand.fast5 c743f660-ee1c-4c78-9545-a55516c1bfc5 a21aacee4115455d15f5783d4115ff1a5edc05c2 342 129.848 4.005 2235 True 0.09225 2235 3.91275 2235 1600 11.107 -0.0009
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch286_read6_strand.fast5 0d489386-cf36-4d7d-8886-e4034cce3333 a21aacee4115455d15f5783d4115ff1a5edc05c2 286 90.75925 10.1435 5757 True 0.06875 5757 10.07475 5757 3976 11.399 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch426_read11_strand.fast5 57040e66-8bb8-42fc-863a-b7f75dc11752 a17eb30893af29b61a9da687a20b3b4df8cc40a1 426 103.1845 29.24925 11891 True 8.43925 11891 20.81 11891 7318 8.631 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch111_read5_strand.fast5 130b760d-08f6-49df-8804-0b6c8d6e099d a21aacee4115455d15f5783d4115ff1a5edc05c2 111 27.01 73.89275 42210 True 0.02375 42210 73.869 42210 29548 11.223 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch374_read33_strand.fast5 c0131b5a-b51b-4c00-aa8b-93ce4e545d33 a21aacee4115455d15f5783d4115ff1a5edc05c2 374 230.7225 15.94475 9086 True 0.04375 9086 15.901 9086 6906 9.848 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch116_read37_strand.fast5 ac624bf8-dfff-4905-bf57-0dc5e4cbcabf a17eb30893af29b61a9da687a20b3b4df8cc40a1 116 238.70875 33.52725 18017 True 1.996 18017 31.53125 18017 8389 7.219 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch109_read30_strand.fast5 71e75d20-ba7f-4af9-8f14-f9169c04602b a21aacee4115455d15f5783d4115ff1a5edc05c2 109 247.40575 15.13625 8649 True 0.0 8649 15.13625 8649 4692 11.074 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch187_read13_strand.fast5 bf984e5f-0769-4160-96cd-ca5f2783d4a4 a17eb30893af29b61a9da687a20b3b4df8cc40a1 187 77.26225 55.1715 26658 True 8.51975 26658 46.65175 26658 7277 9.762 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch99_read25_strand.fast5 7c32c3a7-97f8-49b2-b703-0e52c580c892 a17eb30893af29b61a9da687a20b3b4df8cc40a1 99 77.27475 55.156 20947 True 18.49825 20947 36.65775 20947 4876 9.759 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch77_read16_strand.fast5 b91e15f5-ffcd-4a39-9524-f13eb3c402b7 a17eb30893af29b61a9da687a20b3b4df8cc40a1 77 77.26225 55.1715 25019 True 11.38675 25019 43.78475 25019 5473 9.215 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch496_read17_strand.fast5 8e7ffea0-ec6e-4c34-8ac2-69391ba38451 a17eb30893af29b61a9da687a20b3b4df8cc40a1 496 77.26225 55.17125 7463 True 42.111 7463 13.06025 7463 4879 9.973 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch77_read21_strand.fast5 3788f0e5-3c7d-4e88-a0bb-67b3f8330ba9 a21aacee4115455d15f5783d4115ff1a5edc05c2 77 124.31925 9.534 5426 True 0.03725 5426 9.49675 5426 4046 9.595 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch428_read32_strand.fast5 759ff736-81ec-4262-ae52-6ff8187c948e a21aacee4115455d15f5783d4115ff1a5edc05c2 428 247.4055 76.785 43877 True 0.0 43877 76.785 43877 28787 12.6 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch1_read27_strand.fast5 735a70b8-8af0-47bc-a946-40c4260d3ea9 a17eb30893af29b61a9da687a20b3b4df8cc40a1 1 95.983 36.45075 20829 True 0.0 20829 36.45075 20829 7515 7.47 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch144_read28_strand.fast5 4ddc4d8c-e91d-4840-8d25-69605746e85b a21aacee4115455d15f5783d4115ff1a5edc05c2 144 339.97675 16.68775 3514 True 10.5375 3514 6.15025 3514 2123 9.449 -0.0006
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch455_read60_strand.fast5 8bab06cb-328c-488b-b516-d18196771596 a17eb30893af29b61a9da687a20b3b4df8cc40a1 455 236.70275 35.53325 20304 True 0.0 20304 35.53325 20304 5284 9.571 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch79_read85_strand.fast5 49e36e8d-4319-4f63-9b61-b1f4c11a32de a21aacee4115455d15f5783d4115ff1a5edc05c2 79 228.57425 18.8315 2931 True 13.702 2931 5.1295 2931 1279 7.066 -0.001
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch394_read44_strand.fast5 a76fbb73-65a4-45eb-b97f-36712b6deee8 a17eb30893af29b61a9da687a20b3b4df8cc40a1 394 238.70875 33.52725 14752 True 7.70975 14752 25.8175 14752 9693 9.785 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch36_read24_strand.fast5 7731ece1-f8cc-458e-a866-2ce68a299312 a17eb30893af29b61a9da687a20b3b4df8cc40a1 36 95.98275 36.45075 11872 True 15.67425 11872 20.7765 11872 8135 11.402 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch479_read29_strand.fast5 ab1c76f7-67d1-45e3-b1ca-d6684b00adda a17eb30893af29b61a9da687a20b3b4df8cc40a1 479 77.27275 18.49725 6399 True 7.29875 6399 11.1985 6399 2783 7.298 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch81_read28_strand.fast5 571358bc-a566-48b0-9963-8fea16f478fc a17eb30893af29b61a9da687a20b3b4df8cc40a1 81 95.983 36.4475 20827 True 0.0 20827 36.4475 20827 12961 9.217 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch341_read40_strand.fast5 f8861d75-cb32-4535-8d69-dbbade1de9a7 a17eb30893af29b61a9da687a20b3b4df8cc40a1 341 218.31225 18.3905 10335 True 0.30325 10335 18.08725 10335 4196 9.479 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch371_read34_strand.fast5 c6b70db9-464e-4926-9d46-761ed3533164 a21aacee4115455d15f5783d4115ff1a5edc05c2 371 228.57725 18.8285 7973 True 4.87575 7973 13.95275 7973 5448 13.076 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch201_read27_strand.fast5 dcb5af9f-cae0-4de4-b3d7-864c1bb7343c a17eb30893af29b61a9da687a20b3b4df8cc40a1 201 92.31125 40.1225 20154 True 4.85275 20154 35.26975 20154 12837 9.007 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch244_read24_strand.fast5 4c6fb4ca-c6a9-4aee-acf7-d4c13939144f a17eb30893af29b61a9da687a20b3b4df8cc40a1 244 77.262 55.17175 22813 True 15.2485 22813 39.92325 22813 12674 9.197 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch281_read4_strand.fast5 1724dd1c-9554-4841-a2d6-e8abb6339e51 a21aacee4115455d15f5783d4115ff1a5edc05c2 281 22.27525 78.6275 44698 True 0.40475 44698 78.22275 44698 28168 10.048 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch504_read62_strand.fast5 2645e3aa-5759-486c-a3fd-cb3a480f91d9 a21aacee4115455d15f5783d4115ff1a5edc05c2 504 247.6055 50.1515 9889 True 32.8445 9889 17.307 9889 2318 10.588 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read10_strand.fast5 bcb22d79-b267-44ba-94c0-1493ed4ea54a b5e83402e47ea9927694cb6e80d61180dfc8a49a 130 978.23825 904.05775 229523 True 502.39125 229523 401.6665 229523 34562 7.876 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read24_strand.fast5 fe6bbcb4-c11b-4445-900e-4f4446fb7514 b5e83402e47ea9927694cb6e80d61180dfc8a49a 41 951.754 5.66275 2463 True 1.3515 2463 4.31125 2463 1617 12.695 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch466_read49_strand.fast5 a2479ac3-8b52-4237-8f01-22fd55f87e63 b5e83402e47ea9927694cb6e80d61180dfc8a49a 466 2059.453 62.21075 16138 True 33.96775 16138 28.243 16138 10757 11.02 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch456_read414_strand.fast5 15b4b4ad-9461-4431-b029-260b53a52234 b5e83402e47ea9927694cb6e80d61180dfc8a49a 456 6994.94 170.68075 86153 True 19.913 86153 150.76775 86153 46661 7.206 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch460_read66_strand.fast5 f13ce9fd-b199-4926-80dd-f54d3f555ce0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 460 4779.71375 74.78675 16162 True 46.50275 16162 28.284 16162 4304 8.258 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch486_read15_strand.fast5 3398bada-950d-49b1-84dc-ed2aec3a9c8e b5e83402e47ea9927694cb6e80d61180dfc8a49a 486 1375.9145 35.9085 15456 True 8.8605 15456 27.048 15456 5205 10.859 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read94_strand.fast5 9240a4fa-9745-4279-8f48-5ea9dbf877e2 b5e83402e47ea9927694cb6e80d61180dfc8a49a 82 3407.66425 133.984 69815 True 11.80625 69815 122.17775 69815 47130 10.795 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch146_read166_strand.fast5 eeee5f12-d7bc-41fe-a102-1415033db7b7 b5e83402e47ea9927694cb6e80d61180dfc8a49a 146 1324.89725 28.7115 10176 True 10.90275 10176 17.80875 10176 5685 7.388 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch450_read37_strand.fast5 5f01781c-5b2b-40ad-a9b6-7e31d10a7d00 b5e83402e47ea9927694cb6e80d61180dfc8a49a 450 2820.9115 4.87075 1933 True 1.4865 1933 3.38425 1933 1384 8.508 -0.0009
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch480_read184_strand.fast5 6564aec5-e2a5-475d-96be-65a5bb8235f0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 480 7109.833 55.78775 5554 True 46.067 5554 9.72075 5554 3745 11.043 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch230_read166_strand.fast5 fd986643-0205-48c1-b073-3f1b63c754a4 b5e83402e47ea9927694cb6e80d61180dfc8a49a 230 4851.89725 73.0255 5585 True 63.251 5585 9.7745 5585 3121 7.024 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read28_strand.fast5 7925d0ba-54e5-4380-8982-272b5db8944a b5e83402e47ea9927694cb6e80d61180dfc8a49a 451 1121.3775 107.0485 46719 True 25.29025 46719 81.75825 46719 31669 10.48 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch510_read176_strand.fast5 196c712c-681e-40ae-9bab-dc10ef2520b0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 510 1812.2185 85.701 45800 True 5.551 45800 80.15 45800 29590 10.338 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read165_strand.fast5 1e2d92bd-7db1-4af1-9575-b076ebe270e1 b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 4242.75525 1.22325 699 True 0.0 699 1.22325 699 452 10.763 -0.0021
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read59_strand.fast5 cffeab45-65c7-4307-8d0d-d3a166b421a6 b5e83402e47ea9927694cb6e80d61180dfc8a49a 451 2621.16125 177.64125 5195 True 168.54975 5195 9.0915 5195 2605 10.091 -0.0005
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read161_strand.fast5 2226c271-0f3f-4382-8310-2deac247ad17 b5e83402e47ea9927694cb6e80d61180dfc8a49a 355 6273.68875 41.3395 20902 True 4.76 20902 36.5795 20902 12215 9.476 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch140_read382_strand.fast5 43178b7b-0b39-4cfc-8f45-d8bcfc3a6d60 b5e83402e47ea9927694cb6e80d61180dfc8a49a 140 4851.789 54.23325 22638 True 14.61675 22638 39.6165 22638 12458 7.385 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch240_read492_strand.fast5 b6bca176-ca68-43da-b343-4ab347129179 b5e83402e47ea9927694cb6e80d61180dfc8a49a 240 5366.3005 29.951 6869 True 17.9295 6869 12.0215 6869 4412 9.251 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read133_strand.fast5 230166aa-82ec-43a2-ab27-1e13bb2d6315 b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 3211.29025 15.884 1025 True 14.09025 1025 1.79375 1025 734 10.485 -0.0014
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch32_read74_strand.fast5 5c3d3eb2-c6e6-4d32-a85a-25549093e36a b5e83402e47ea9927694cb6e80d61180dfc8a49a 32 5397.25175 212.03875 88422 True 57.29975 88422 154.739 88422 41951 7.306 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read30_strand.fast5 96eca569-8bbc-4aeb-8ac9-df5ec2d2e3da b5e83402e47ea9927694cb6e80d61180dfc8a49a 130 2394.98625 164.113 61409 True 56.64725 61409 107.46575 61409 21803 7.058 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch194_read705_strand.fast5 25b60464-d222-4fed-850d-0dd72aabd494 b5e83402e47ea9927694cb6e80d61180dfc8a49a 194 6943.93825 33.16525 11926 True 12.29325 11926 20.872 11926 6450 7.134 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch416_read9_strand.fast5 73d30dd4-2c0b-4bfb-9bab-e3d21b3ff72a b5e83402e47ea9927694cb6e80d61180dfc8a49a 416 93.68625 252.9995 140395 True 7.30825 140395 245.69125 140395 36482 8.808 -0.0003
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read21_strand.fast5 81c009b8-41bf-4b1b-a773-e9f0d7e7478c b5e83402e47ea9927694cb6e80d61180dfc8a49a 130 2116.23 133.44775 71769 True 7.85125 71769 125.5965 71769 20497 7.344 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read117_strand.fast5 c2c3df2d-3a86-44c1-98f6-b167fde8a7f0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 212 6217.24475 79.95375 12206 True 58.59175 12206 21.362 12206 2028 9.725 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read68_strand.fast5 54a992ea-88ab-4661-87d6-90a919e9b2f7 b5e83402e47ea9927694cb6e80d61180dfc8a49a 41 1989.97075 51.33025 6080 True 40.689 6080 10.64125 6080 4224 12.107 -0.0003
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+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch162_read6_strand.fast5 9dbf286e-ab09-4d41-bca5-595bbf699680 b5e83402e47ea9927694cb6e80d61180dfc8a49a 162 222.2855 636.86375 358800 True 8.96375 358800 627.9 358800 226843 9.142 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch371_read193_strand.fast5 50eaa9e0-c6ab-437b-8f9f-409adfd74e3e b5e83402e47ea9927694cb6e80d61180dfc8a49a 371 2394.9865 28.852 11699 True 8.378 11699 20.474 11699 7901 11.421 -0.0004
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read17_strand.fast5 a855b193-5d40-4f76-bc1e-4860445c00ff b5e83402e47ea9927694cb6e80d61180dfc8a49a 172 643.713 47.149 18431 True 14.8945 18431 32.2545 18431 12868 10.57 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch227_read127_strand.fast5 f861636e-24f0-4fed-b055-2ea1601ff7a9 b5e83402e47ea9927694cb6e80d61180dfc8a49a 227 1070.111 39.85275 15983 True 11.8825 15983 27.97025 15983 9859 8.301 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch281_read45_strand.fast5 1b7c684e-5818-4a84-bc41-fb0a2a6c09c6 b5e83402e47ea9927694cb6e80d61180dfc8a49a 281 719.727 16.037 6681 True 4.34425 6681 11.69275 6681 3672 10.052 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read9_strand.fast5 ef225f6c-8d40-4379-bb30-78528bc7a614 b5e83402e47ea9927694cb6e80d61180dfc8a49a 41 379.46175 261.19475 146956 True 4.02125 146956 257.1735 146956 97730 12.778 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch1_read18_strand.fast5 c4067b38-9230-47f6-8067-8523a4cd6943 b5e83402e47ea9927694cb6e80d61180dfc8a49a 1 913.9115 176.212 100692 True 0.0 100692 176.212 100692 61083 10.865 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch410_read2_strand.fast5 55b4e969-8678-4879-b0aa-b6c68588ebe0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 410 6.86575 177.971 77859 True 41.7165 77859 136.2545 77859 52263 11.529 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read52_strand.fast5 becc4d21-cd46-4d44-91e7-163ffe82effc b5e83402e47ea9927694cb6e80d61180dfc8a49a 81 1464.2685 75.085 42905 True 0.0 42905 75.085 42905 29436 10.618 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch202_read37_strand.fast5 0f34150b-70ef-460f-9462-53d0467bb850 b5e83402e47ea9927694cb6e80d61180dfc8a49a 202 978.22375 702.64025 397442 True 7.11525 397442 695.525 397442 195020 11.005 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch438_read18_strand.fast5 72926f1a-9fef-45ae-bd2e-ee16ba20f021 b5e83402e47ea9927694cb6e80d61180dfc8a49a 438 638.27175 54.7345 23882 True 12.94025 23882 41.79425 23882 14317 10.854 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch244_read57_strand.fast5 bb821a5b-d052-4e42-8fea-79c27ac72eb6 b5e83402e47ea9927694cb6e80d61180dfc8a49a 244 3365.31525 79.483 38483 True 12.13775 38483 67.34525 38483 9920 8.203 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch117_read278_strand.fast5 53f8170a-e522-4d52-bbd8-134631af065f b5e83402e47ea9927694cb6e80d61180dfc8a49a 117 5939.2075 28.77325 953 True 27.105 953 1.66825 953 652 7.612 -0.0021
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read37_strand.fast5 b306e42b-beba-4abd-8450-c66d72deb5d6 b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 750.70275 130.9815 73487 True 2.379 73487 128.6025 73487 50079 12.389 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch450_read19_strand.fast5 a03993f5-af1f-417a-a161-c2a1aeba6dc0 b5e83402e47ea9927694cb6e80d61180dfc8a49a 450 1837.22875 32.55 13234 True 9.38975 13234 23.16025 13234 8460 9.654 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch466_read27_strand.fast5 227d640b-ce35-4f54-899a-053be7aaf453 b5e83402e47ea9927694cb6e80d61180dfc8a49a 466 1262.27875 334.78875 124541 True 116.8405 124541 217.94825 124541 40121 10.992 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read17_strand.fast5 797358c0-3c2b-445d-90dc-23fc03773c5c b5e83402e47ea9927694cb6e80d61180dfc8a49a 41 796.35 108.718 45964 True 28.28025 45964 80.43775 45964 30232 12.612 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch427_read82_strand.fast5 b6297b04-d06c-49fd-a638-12fd7c651d38 b5e83402e47ea9927694cb6e80d61180dfc8a49a 427 3985.45375 29.71125 9654 True 12.816 9654 16.89525 9654 2117 9.689 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read168_strand.fast5 31969e9e-3eef-43f4-a191-bf21461cecd7 b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 4278.60525 96.5135 36857 True 32.013 36857 64.5005 36857 17307 11.211 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read84_strand.fast5 93556a18-3105-46a9-b5f5-97b5c39bf009 b5e83402e47ea9927694cb6e80d61180dfc8a49a 124 1936.194 42.8865 19680 True 8.4455 19680 34.441 19680 13629 12.207 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch134_read99_strand.fast5 f7fadf30-8f49-43fa-8d0f-d03cd1008014 b5e83402e47ea9927694cb6e80d61180dfc8a49a 134 5697.78375 183.7215 104749 True 0.40925 104749 183.31225 104749 60639 7.597 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read116_strand.fast5 cdb1a77a-27c2-40da-b92a-62ceb4db13a8 b5e83402e47ea9927694cb6e80d61180dfc8a49a 172 4790.1415 183.90375 97566 True 13.16175 97566 170.742 97566 46598 10.576 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch341_read61_strand.fast5 ccf38b85-bb53-4034-b7c7-284438099fd9 b5e83402e47ea9927694cb6e80d61180dfc8a49a 341 3966.80075 139.2955 47170 True 56.74675 47170 82.54875 47170 28621 8.747 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch344_read110_strand.fast5 2120bbb3-a266-4568-8f84-8be826cbe238 b5e83402e47ea9927694cb6e80d61180dfc8a49a 344 3996.12375 379.86025 111616 True 184.53125 111616 195.329 111616 72669 11.733 -0.0001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch198_read335_strand.fast5 d9e8ec01-a31a-453c-af80-24460db627c9 b5e83402e47ea9927694cb6e80d61180dfc8a49a 198 3419.03875 127.0045 57451 True 26.4645 57451 100.54 57451 36836 11.185 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch485_read113_strand.fast5 7f8e3595-8dd0-4289-9f2a-8a114c091876 b5e83402e47ea9927694cb6e80d61180dfc8a49a 485 4269.23925 28.715 986 True 26.98825 986 1.72675 986 674 12.45 -0.001
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch373_read20_strand.fast5 8e2a24e3-7544-415e-9a54-4d9a10cc51eb b5e83402e47ea9927694cb6e80d61180dfc8a49a 373 571.1535 284.28875 158338 True 7.19675 158338 277.092 158338 87144 11.372 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch396_read701_strand.fast5 04e2b985-8c2b-4a97-a9e2-80030ddabfc1 b5e83402e47ea9927694cb6e80d61180dfc8a49a 396 6805.54525 105.43925 53548 True 11.73 53548 93.70925 53548 12918 8.543 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read101_strand.fast5 34879fda-f781-475c-8747-5e1b22f95f21 b5e83402e47ea9927694cb6e80d61180dfc8a49a 81 2689.99175 173.02925 96370 True 4.3805 96370 168.64875 96370 65456 10.347 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read62_strand.fast5 3d9d01cc-7e74-44ef-86b2-48552514f851 b5e83402e47ea9927694cb6e80d61180dfc8a49a 451 2840.72575 142.27525 66740 True 25.479 66740 116.79625 66740 24111 8.087 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch283_read106_strand.fast5 ad989cd2-0408-45b6-b8d5-ae456180c90a b5e83402e47ea9927694cb6e80d61180dfc8a49a 283 5026.3605 611.76225 341340 True 14.41625 341340 597.346 341340 137822 7.035 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch210_read94_strand.fast5 0112c3a2-1cea-4788-837c-1004f544d283 b5e83402e47ea9927694cb6e80d61180dfc8a49a 210 3455.443 1474.272 837665 True 8.35725 837665 1465.91475 837665 341725 11.846 -0.0002
+nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch31_read14_strand.fast5 71bcbd58-47c9-479b-b47f-d5c254f7ad53 b5e83402e47ea9927694cb6e80d61180dfc8a49a 31 1014.14725 1102.06475 622247 True 13.13125 622247 1088.9335 622247 393431 10.573 -0.0002
=====================================
debian/python3-nanoget-examples.install
=====================================
@@ -0,0 +1 @@
+debian/missing-source/nanotest usr/share/doc/python3-nanoget/examples
=====================================
debian/python3-nanoget.install
=====================================
@@ -0,0 +1 @@
+# usr
=====================================
debian/rules
=====================================
@@ -1,27 +1,19 @@
#!/usr/bin/make -f
# DH_VERBOSE := 1
-export LC_ALL=C.UTF-8
-include /usr/share/dpkg/default.mk
-# this provides:
-# DEB_SOURCE: the source package name
-# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision)
-# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision
-# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch
-# DEB_VERSION_UPSTREAM: the package's upstream version
-# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog
-# SOURCE_DATE_EPOCH: the source release date as seconds since the epoch, as
-# specified by <https://reproducible-builds.org/specs/source-date-epoch/>
-
-# for hardening you might like to uncomment this:
-# export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+export PYBUILD_NAME=nanoget
%:
dh $@ --with python3 --buildsystem=pybuild
-### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected
+override_dh_installexamples:
+ dh_installexamples
+ mv `find debian/python3-$(PYBUILD_NAME) -name test.py` debian/python3-$(PYBUILD_NAME)-examples/usr/share/doc/python3-$(PYBUILD_NAME)/examples
+ find debian -name __pycache__ -type d | xargs rm -rf
+ find debian -name scripts -type d -empty | xargs rmdir
+
#override_dh_auto_test:
#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
-# do_stuff_for_testing
+# PYTHONPATH=$(shell pybuild --print build_dir --interpreter python3) python3 scripts/test.py | true
#endif
=====================================
debian/source/include-binaries
=====================================
@@ -0,0 +1,4 @@
+debian/missing-source/nanotest/alignment.bam
+debian/missing-source/nanotest/alignment.bam.bai_orig
+debian/missing-source/nanotest/reads.fa.gz
+debian/missing-source/nanotest/reads.fastq.gz
=====================================
debian/tests/run-unit-test
=====================================
@@ -1,14 +1,11 @@
#!/bin/bash
set -e
-pkg=#PACKAGENAME#
+pkg=python3-nanoget
export LC_ALL=C.UTF-8
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
- # Double quote below to expand the temporary directory variable now versus
- # later is on purpose.
- # shellcheck disable=SC2064
trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi
@@ -16,4 +13,13 @@ cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
cd "${AUTOPKGTEST_TMP}"
-#do_stuff_to_test_package#
+gunzip nanotest/[as]*.gz
+
+python3 test.py
+
+if diff nanotest/alignment.bam.bai_orig nanotest/alignment.bam.bai ; then
+ echo "Pass"
+else
+ echo "Fail"
+ exit 1
+fi
View it on GitLab: https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7
--
View it on GitLab: https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7
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