Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1017d619 by Andreas Tille at 2020-04-27T13:45:14+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,26 +1,25 @@
-Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
+Last-Update: Mon, 27 Apr 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 171 | {covid-19,imaging} |
- orthanc | 93 | {covid-19,practice,imaging} |
- gdcm | 46 | {imaging-dev} |
- orthanc-wsi | 39 | {laboratory,practice,imaging,covid-19,his,oncology} |
+ dcmtk | 173 | {covid-19,imaging} |
+ orthanc | 94 | {covid-19,practice,imaging} |
+ gdcm | 45 | {imaging-dev} |
+ orthanc-wsi | 38 | {laboratory,practice,imaging,covid-19,his,oncology} |
dicomscope | 32 | {imaging} |
dicom3tools | 31 | {imaging} |
- amide | 30 | {imaging} |
- htsjdk | 29 | {bio-dev} |
- dcm2niix | 28 | {imaging} |
- gdcm | 28 | {imaging,covid-19} |
- gnumed-server | 19 | {covid-19,practice} |
+ htsjdk | 30 | {bio-dev} |
+ dcm2niix | 29 | {imaging} |
+ gdcm | 29 | {imaging,covid-19} |
openslide | 19 | {imaging} |
+ gnumed-server | 18 | {covid-19,practice} |
pixelmed | 18 | {imaging} |
king | 17 | {typesetting,imaging} |
minc-tools | 17 | {imaging} |
- plastimatch | 17 | {imaging} |
hunspell-en-med | 16 | {tools} |
invesalius | 16 | {imaging} |
ngs-sdk | 16 | {bio-dev} |
+ plastimatch | 16 | {imaging} |
adun.app | 14 | {bio} |
biosig4c++ | 14 | {imaging,physics} |
vtk-dicom | 14 | {imaging} |
@@ -28,41 +27,44 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
gasic | 11 | {bio,cloud} |
obitools | 11 | {bio} |
gdcm | 10 | {imaging-dev} |
- insighttoolkit4 | 10 | {imaging-dev} |
jebl2 | 10 | {bio-dev} |
mipe | 9 | {cloud,bio} |
ncbi-entrez-direct | 9 | {bio} |
ngs-sdk | 9 | {bio-dev} |
parsnp | 9 | {bio} |
tree-puzzle | 9 | {bio-phylogeny,cloud,bio} |
+ ampliconnoise | 8 | {cloud,bio} |
biojava-live | 8 | {bio-dev} |
ea-utils | 8 | {bio} |
fitgcp | 8 | {bio,cloud} |
- ampliconnoise | 7 | {cloud,bio} |
+ insighttoolkit4 | 8 | {imaging-dev} |
+ melting | 8 | {bio,cloud} |
cgview | 7 | {bio} |
+ embassy-domainatrix | 7 | {cloud,bio} |
fastlink | 7 | {bio,cloud} |
jaligner | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
- melting | 7 | {bio,cloud} |
paml | 7 | {bio} |
staden | 7 | {bio} |
alter-sequence-alignment | 6 | {bio} |
+ anfo | 6 | {bio,cloud} |
arden | 6 | {cloud,bio} |
biomaj3-cli | 6 | {cloud} |
bppsuite | 6 | {bio} |
- cluster3 | 6 | {bio} |
codonw | 6 | {bio} |
dazzdb | 6 | {bio} |
diamond-aligner | 6 | {bio,covid-19} |
ecopcr | 6 | {bio} |
edtsurf | 6 | {bio} |
- embassy-domainatrix | 6 | {cloud,bio} |
+ embassy-domalign | 6 | {cloud,bio} |
+ embassy-domsearch | 6 | {bio,cloud} |
freebayes | 6 | {bio} |
freecontact | 6 | {cloud,bio} |
indelible | 6 | {bio} |
king-probe | 6 | {bio} |
libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
+ maqview | 6 | {bio} |
mrs | 6 | {bio} |
ncbi-seg | 6 | {bio} |
neobio | 6 | {cloud,bio} |
@@ -78,7 +80,7 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
sibsim4 | 6 | {cloud,bio} |
sigma-align | 6 | {bio,cloud,bio-phylogeny} |
spread-phy | 6 | {bio,bio-phylogeny} |
- anfo | 5 | {bio,cloud} |
+ squizz | 6 | {bio,cloud} |
beads | 5 | {bio} |
biomaj3-daemon | 5 | {bio} |
bio-rainbow | 5 | {bio} |
@@ -86,16 +88,14 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
bitseq | 5 | {bio} |
centrifuge | 5 | {bio} |
clonalorigin | 5 | {bio} |
+ cluster3 | 5 | {bio} |
daligner | 5 | {bio-ngs,bio} |
delly | 5 | {covid-19,bio} |
- embassy-domalign | 5 | {cloud,bio} |
- embassy-domsearch | 5 | {bio,cloud} |
gatb-core | 5 | {bio} |
harvest-tools | 5 | {bio} |
jellyfish1 | 5 | {bio} |
lagan | 5 | {bio} |
mapsembler2 | 5 | {bio,cloud} |
- maqview | 5 | {bio} |
mhap | 5 | {bio-ngs,bio} |
microbegps | 5 | {bio} |
paraclu | 5 | {bio,cloud} |
@@ -113,7 +113,6 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
saint | 5 | {bio} |
seqtools | 5 | {bio} |
sickle | 5 | {bio} |
- squizz | 5 | {bio,cloud} |
transrate-tools | 5 | {bio} |
transtermhp | 5 | {bio} |
treeview | 5 | {bio-phylogeny,bio} |
@@ -152,10 +151,10 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
relion | 4 | {bio} |
roguenarok | 4 | {bio} |
scythe | 4 | {bio} |
+ segemehl | 4 | {bio} |
sga | 4 | {bio} |
soapsnp | 4 | {bio} |
sprai | 4 | {bio} |
- stacks | 4 | {bio} |
tnseq-transit | 4 | {covid-19,bio} |
tracetuner | 4 | {bio} |
bart-view | 3 | {imaging} |
@@ -183,11 +182,11 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
runcircos-gui | 3 | {bio} |
samblaster | 3 | {covid-19,bio} |
scrm | 3 | {bio} |
- segemehl | 3 | {bio} |
seqmagick | 3 | {bio,covid-19} |
snap-aligner | 3 | {bio} |
soapaligner | 3 | {bio} |
spaced | 3 | {bio} |
+ stacks | 3 | {bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
vsearch | 3 | {bio} |
@@ -201,7 +200,6 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
getdata | 2 | {bio} |
libvistaio | 2 | {imaging-dev} |
logol | 2 | {bio} |
- maxflow | 2 | {imaging-dev} |
nanook | 2 | {bio} |
ngs-sdk | 2 | {bio-dev} |
openslide | 2 | {imaging-dev} |
@@ -296,8 +294,8 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -309,5 +307,5 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000
vtk-dicom | 0 | {imaging-dev} |
wtdbg2 | 0 | {covid-19} |
bustools | -1 | {bio} |
-(337 rows)
+(334 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1017d619b350d2986ea753d57989d7f77eca7dfb
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1017d619b350d2986ea753d57989d7f77eca7dfb
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