[med-svn] [Git][med-team/biobambam2][upstream] New upstream version 2.0.173+ds

[Étienne Mollier]

Étienne Mollier pushed to branch upstream at Debian Med / biobambam2


Commits:
04cab22d by Étienne Mollier at 2020-08-08T12:14:01+02:00
New upstream version 2.0.173+ds
- - - - -


30 changed files:

- .gitignore
- ChangeLog
- configure.ac
- src/Makefile.am
- src/biobambam2/DepthIntervalGetter.hpp
- src/biobambam2/Reference.hpp
- src/programs/bam12auxmerge.cpp
- src/programs/bam12split.cpp
- src/programs/bam12strip.cpp
- src/programs/bamadapterclip.cpp
- src/programs/bamadapterfind.cpp
- src/programs/bamalignfrac.cpp
- src/programs/bamauxmerge.cpp
- src/programs/bamauxmerge2.cpp
- src/programs/bamauxsort.cpp
- src/programs/bamcat.cpp
- src/programs/bamclipXT.cpp
- src/programs/bamclipreinsert.cpp
- src/programs/bamcollate2.cpp
- src/programs/bamconsensus.cpp
- src/programs/bamdownsamplerandom.cpp
- src/programs/bamexondepth.cpp
- src/programs/bamexplode.cpp
- src/programs/bamexploderef.cpp
- src/programs/bamexploderg.cpp
- src/programs/bamfastcat.cpp
- src/programs/bamfastexploderef.cpp
- src/programs/bamfeaturecount.cpp
- src/programs/bamfillquery.cpp
- src/programs/bamfilter.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/commit/04cab22db968f19dfc695a2a4d74a46366c28de3

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View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/commit/04cab22db968f19dfc695a2a4d74a46366c28de3
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