[med-svn] [Git][med-team/pftools][master] 2 commits: Fix patch

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / pftools


Commits:
058dff3a by Andreas Tille at 2020-12-17T21:47:44+01:00
Fix patch

- - - - -
49848156 by Andreas Tille at 2020-12-17T21:53:26+01:00
Fix name for README

- - - - -


2 changed files:

- debian/docs
- debian/patches/destdir_for_examples.patch


Changes:

=====================================
debian/docs
=====================================
@@ -1,4 +1,4 @@
 debian/README.test
 debian/tests/run-unit-test
-README
+README*
 doc/profile.txt


=====================================
debian/patches/destdir_for_examples.patch
=====================================
@@ -16,11 +16,11 @@ Description: take DESTDIR into account, because the built-in cmake function inst
 -INSTALL(CODE "FILE(RENAME ${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh.cmake               ${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh)")
 -INSTALL(CODE "FILE(RENAME ${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl.cmake      ${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl)")
 -INSTALL(CODE "FILE(RENAME ${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl.cmake ${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl)")
-+INSTALL(CODE "EXECUTE_PROCESS(COMMAND find ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec chmod a+rx {} \;)")
-+INSTALL(CODE "EXECUTE_PROCESS(COMMAND find ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec sed -i \"s|@DATA_DIR@/Matrices|${CMAKE_INSTALL_PREFIX}/share/data/cmp|; s|@PERL_SCRIPT_DIR@|${CMAKE_INSTALL_PREFIX}/bin|\" {} \;)")
-+INSTALL(CODE "EXECUTE_PROCESS(COMMAND find ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec perl -i -pe \"s|.<TARGET_FILE:(.+?)>|${CMAKE_INSTALL_PREFIX}/bin/$1|\" {} \;)")
-+INSTALL(CODE "FILE(RENAME ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V2.sh.cmake               ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V2.sh)")
-+INSTALL(CODE "FILE(RENAME ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh.cmake               ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh)")
-+INSTALL(CODE "FILE(RENAME ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl.cmake      ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl)")
-+INSTALL(CODE "FILE(RENAME ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl.cmake ${DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl)")
++INSTALL(CODE "EXECUTE_PROCESS(COMMAND find \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec chmod a+rx {} \;)")
++INSTALL(CODE "EXECUTE_PROCESS(COMMAND find \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec sed -i \"s|@DATA_DIR@/Matrices|${CMAKE_INSTALL_PREFIX}/share/data/cmp|; s|@PERL_SCRIPT_DIR@|${CMAKE_INSTALL_PREFIX}/bin|\" {} \;)")
++INSTALL(CODE "EXECUTE_PROCESS(COMMAND find \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/ -type f -name \*.cmake -exec perl -i -pe \"s|.<TARGET_FILE:(.+?)>|${CMAKE_INSTALL_PREFIX}/bin/$1|\" {} \;)")
++INSTALL(CODE "FILE(RENAME \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V2.sh.cmake               \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V2.sh)")
++INSTALL(CODE "FILE(RENAME \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh.cmake               \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_V3.sh)")
++INSTALL(CODE "FILE(RENAME \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl.cmake      \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_scan_search.pl)")
++INSTALL(CODE "FILE(RENAME \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl.cmake \$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/examples/test_pfsearchV3_iupac.pl)")
  



View it on GitLab: https://salsa.debian.org/med-team/pftools/-/compare/4aac978b4166030668477d9b5d95b91a9658370e...498481569b9d46d3e53b23acd329fdaf78875de3

-- 
View it on GitLab: https://salsa.debian.org/med-team/pftools/-/compare/4aac978b4166030668477d9b5d95b91a9658370e...498481569b9d46d3e53b23acd329fdaf78875de3
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