[med-svn] [Git][med-team/augustus][master] 14 commits: remove docs tutorial dir from Files-Excluded

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / augustus


Commits:
7d19785a by Sascha Steinbiss at 2020-12-28T18:38:02+01:00
remove docs tutorial dir from Files-Excluded

- - - - -
da55a5ec by Sascha Steinbiss at 2020-12-28T23:56:43+01:00
extend doc-base

- - - - -
49d81656 by Sascha Steinbiss at 2020-12-28T23:57:16+01:00
update d/changelog

- - - - -
5938fa3d by Sascha Steinbiss at 2020-12-28T23:57:57+01:00
use patches prepared by upstream

- - - - -
f66f74bc by Sascha Steinbiss at 2020-12-28T23:58:19+01:00
remove obsolete directories from Files-Excluded

- - - - -
ebbe9d50 by Sascha Steinbiss at 2020-12-28T23:58:43+01:00
add Suggests for dependencies of the scripts

- - - - -
9f22f818 by Sascha Steinbiss at 2020-12-28T23:59:10+01:00
add some new build-deps and remove old libbam-dev build-dep

- - - - -
5a5596cb by Sascha Steinbiss at 2020-12-28T23:59:54+01:00
remove Build-Using mechanics for libbam-dev

- - - - -
1ae0f94a by Sascha Steinbiss at 2020-12-29T00:00:07+01:00
add some additional tools to install

- - - - -
bf78fa38 by Sascha Steinbiss at 2020-12-29T00:00:27+01:00
New upstream version 3.4.0+dfsg2
- - - - -
a8b7df07 by Sascha Steinbiss at 2020-12-29T00:13:18+01:00
Update upstream source from tag 'upstream/3.4.0+dfsg2'

Update to upstream version '3.4.0+dfsg2'
with Debian dir 7c88fbdda665e4a0ef38baac502a044608b8bb7a
- - - - -
9e819963 by Sascha Steinbiss at 2020-12-29T01:10:40+01:00
final 3.4.0 cleanups

- - - - -
c0986aff by Sascha Steinbiss at 2020-12-29T01:15:51+01:00
adjust doc-base

- - - - -
7074dce9 by Sascha Steinbiss at 2020-12-29T01:16:23+01:00
remove obsolete "Team upload" changelog entry

- - - - -


30 changed files:

- debian/augustus-doc.doc-base
- debian/changelog
- debian/control
- debian/copyright
- − debian/patches/buildflags.patch
- debian/patches/interpreter_paths.patch
- debian/patches/keep_cflags
- debian/patches/search_config_path
- debian/patches/series
- debian/patches/set_installdir
- + debian/patches/switch_cgp_testing_off.patch
- debian/rules
- + docs/tutorial2015/augustus.css
- + docs/tutorial2015/data/chr2L.sm.fa.gz
- + docs/tutorial2015/data/rnaseq1.fq
- + docs/tutorial2015/data/rnaseq2.fq
- + docs/tutorial2015/index.html
- + docs/tutorial2015/ittrain.html
- + docs/tutorial2015/ppx.html
- + docs/tutorial2015/prediction.html
- + docs/tutorial2015/results/README.TXT
- + docs/tutorial2015/results/aug.nasonia.1-1M.gff
- + docs/tutorial2015/results/aug.nasonia.hints.gff
- + docs/tutorial2015/results/aug.tomato.1-1M.gff
- + docs/tutorial2015/results/aug.zebrafish.1-1M.gff
- + docs/tutorial2015/results/chrom.sizes
- + docs/tutorial2015/results/customtrack
- + docs/tutorial2015/results/customtrack.whints.gz
- + docs/tutorial2015/results/do.sh
- + docs/tutorial2015/results/firsttest.out


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augustus/-/compare/f6b3fb3b199d4dd23b41246b6b5b62ff739d9acd...7074dce9b495056524a197459dd1b6a0a9f8edf2

-- 
View it on GitLab: https://salsa.debian.org/med-team/augustus/-/compare/f6b3fb3b199d4dd23b41246b6b5b62ff739d9acd...7074dce9b495056524a197459dd1b6a0a9f8edf2
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201229/a82e7a66/attachment.html>