[med-svn] [Git][med-team/fasta3][master] 7 commits: Breaks+Replaces: fasta3 (<< 36.3.8h)

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / fasta3


Commits:
d9231df1 by Andreas Tille at 2020-01-11T06:37:56+01:00
Breaks+Replaces: fasta3 (<< 36.3.8h)

- - - - -
14aa35f3 by Andreas Tille at 2020-01-11T06:38:34+01:00
R-U: Trailing whitespace in debian/copyright

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048be9e2 by Andreas Tille at 2020-01-11T06:38:34+01:00
R-U: Trailing whitespace in debian/rules

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32a12f6c by Andreas Tille at 2020-01-11T06:38:35+01:00
Trim trailing whitespace.

Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html

- - - - -
95a4c5e1 by Andreas Tille at 2020-01-11T06:38:44+01:00
Use secure URI in Homepage field.

Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html

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ab2073c5 by Andreas Tille at 2020-01-11T06:51:55+01:00
Fix regexp in d/copyright

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aeeefb9f by Andreas Tille at 2020-01-11T06:56:53+01:00
Upload to unstable

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4 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+fasta3 (36.3.8h-2) unstable; urgency=medium
+
+  * Team upload.
+  * Breaks+Replaces: fasta3 (<< 36.3.8h)
+    Closes: #948597
+  * Remove trailing whitespace in debian/copyright
+  * Remove trailing whitespace in debian/rules
+  * Trim trailing whitespace.
+  * Use secure URI in Homepage field.
+  * Fix regexp in d/copyright
+  * Package fasta3-doc in section non-free/doc
+
+ -- Andreas Tille <tille at debian.org>  Sat, 11 Jan 2020 06:55:15 +0100
+
 fasta3 (36.3.8h-1) unstable; urgency=medium
 
   [ Andreas Tille ]


=====================================
debian/control
=====================================
@@ -9,7 +9,7 @@ Build-Depends: debhelper-compat (= 12),
 Standards-Version: 4.4.1
 Vcs-Browser: https://salsa.debian.org/med-team/fasta3
 Vcs-Git: https://salsa.debian.org/med-team/fasta3.git
-Homepage: http://fasta.bioch.virginia.edu
+Homepage: https://fasta.bioch.virginia.edu
 
 Package: fasta3
 Architecture: any
@@ -61,8 +61,11 @@ Description: tools for searching collections of biological sequences
 
 Package: fasta3-doc
 Architecture: all
+Section: non-free/doc
 Depends: ${shlibs:Depends},
          ${misc:Depends}
+Breaks: fasta3 (<< 36.3.8h)
+Replaces: fasta3 (<< 36.3.8h)
 Description: user guide for FASTA tools
  The FASTA programs find regions of local or global similarity between
  Protein or DNA sequences, either by searching Protein or DNA databases,


=====================================
debian/copyright
=====================================
@@ -9,7 +9,7 @@ License: Apache-2.0
 
 Files: src/wm_align.c
 Copyright: William R. Pearson, University of Virginia
-           Webb Miller, Penn State University 
+           Webb Miller, Penn State University
 License: Apache-2.0
 
 Files: src/karlin.c
@@ -21,7 +21,7 @@ Copyright: 2004, Erik Lindahl <lindahl at sbc.su.se>
     Stockholm Bioinformatics Center, 2004
 License: Apache-2.0
 
-Files: src/glo[bc]al_sse2.[ch]
+Files: src/glo*sse2.*
        src/smith_waterman_sse2.c
 Copyright: 2006,2010 Michael Farrar <farrar.michael at gmail.com>
 License: Academics-only


=====================================
debian/rules
=====================================
@@ -22,7 +22,7 @@ LDFLAGS+=-flto
 #export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed
 
 %:
-	dh $@ 
+	dh $@
 
 override_dh_auto_build:
 	cd src && $(MAKE) -f $(MAKEFILE)
@@ -32,4 +32,3 @@ override_dh_auto_clean:
 
 override_dh_compress:
 	dh_compress --exclude=.pdf
-



View it on GitLab: https://salsa.debian.org/med-team/fasta3/compare/95a8bce468d62c0a89ace9010063aa6c015dfb1f...aeeefb9f59aa5421cf5533aab4472c1244984add

-- 
View it on GitLab: https://salsa.debian.org/med-team/fasta3/compare/95a8bce468d62c0a89ace9010063aa6c015dfb1f...aeeefb9f59aa5421cf5533aab4472c1244984add
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