Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
c124eb53 by Andreas Tille at 2020-07-03T13:44:03+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,12 +1,12 @@
-Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
+Last-Update: Fri, 03 Jul 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 182 | {covid-19,imaging} |
+ dcmtk | 183 | {covid-19,imaging} |
orthanc | 94 | {covid-19,imaging,practice} |
- gdcm | 46 | {imaging-dev} |
+ gdcm | 49 | {imaging-dev} |
orthanc-wsi | 44 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 34 | {bio-dev} |
+ htsjdk | 32 | {bio-dev} |
dcm2niix | 22 | {imaging} |
dicomscope | 21 | {imaging} |
dicom3tools | 20 | {imaging} |
@@ -14,26 +14,25 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
ngs-sdk | 17 | {bio-dev} |
gdcm | 16 | {covid-19,imaging} |
gdcm | 13 | {imaging-dev} |
- insighttoolkit4 | 12 | {imaging-dev} |
+ insighttoolkit4 | 13 | {imaging-dev} |
invesalius | 12 | {imaging} |
jebl2 | 11 | {bio-dev} |
minc-tools | 11 | {imaging} |
dicompyler | 9 | {oncology} |
+ ngs-sdk | 9 | {bio-dev} |
pixelmed | 9 | {imaging} |
psychopy | 9 | {psychology} |
adun.app | 8 | {bio} |
+ biosig4c++ | 8 | {physics,imaging} |
libdivsufsort | 8 | {bio-dev} |
melting | 8 | {bio,cloud} |
- ngs-sdk | 8 | {bio-dev} |
openslide | 8 | {imaging} |
plastimatch | 8 | {imaging} |
- pymia | 8 | {imaging-dev} |
vtk-dicom | 8 | {imaging} |
- biosig4c++ | 7 | {physics,imaging} |
lagan | 7 | {bio} |
libminc | 7 | {imaging-dev} |
- maqview | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
+ pymia | 7 | {imaging-dev} |
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
ea-utils | 6 | {bio} |
@@ -43,7 +42,6 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
obitools | 6 | {bio} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
paraclu | 6 | {cloud,bio} |
- seqsero | 6 | {bio} |
anfo | 5 | {bio,cloud} |
biojava-live | 5 | {bio-dev} |
fastlink | 5 | {cloud,bio} |
@@ -51,11 +49,13 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
jaligner | 5 | {bio} |
mlv-smile | 5 | {bio,cloud} |
orthanc-mysql | 5 | {imaging} |
+ seqsero | 5 | {bio} |
sibsim4 | 5 | {bio,cloud} |
sigma-align | 5 | {bio-phylogeny,cloud,bio} |
staden | 5 | {bio} |
zalign | 5 | {cloud,bio} |
bart-view | 4 | {imaging} |
+ biomaj3-cli | 4 | {cloud} |
gatb-core | 4 | {bio} |
microbegps | 4 | {bio} |
mipe | 4 | {cloud,bio} |
@@ -63,18 +63,18 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
ncbi-seg | 4 | {bio} |
neobio | 4 | {cloud,bio} |
orthanc-postgresql | 4 | {imaging} |
- pal2nal | 4 | {bio} |
phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
qrisk2 | 4 | {practice} |
salmon | 4 | {bio,covid-19} |
+ seqmagick | 4 | {covid-19,bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
squizz | 4 | {bio,cloud} |
tnseq-transit | 4 | {covid-19,bio} |
transtermhp | 4 | {bio} |
ampliconnoise | 3 | {cloud,bio} |
bandage | 3 | {bio} |
- biomaj3-cli | 3 | {cloud} |
+ biomaj3-daemon | 3 | {bio} |
brig | 3 | {bio} |
busco | 3 | {covid-19,bio} |
delly | 3 | {bio,covid-19} |
@@ -106,16 +106,15 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
saint | 3 | {bio} |
scythe | 3 | {bio} |
segemehl | 3 | {bio} |
- seqmagick | 3 | {covid-19,bio} |
snap-aligner | 3 | {bio} |
tracetuner | 3 | {bio} |
+ tvc | 3 | {bio} |
alter-sequence-alignment | 2 | {bio} |
arden | 2 | {bio,cloud} |
assemblytics | 2 | {bio} |
baitfisher | 2 | {bio} |
beast2-mcmc | 2 | {bio} |
beast-mcmc | 2 | {bio-phylogeny,bio} |
- biomaj3-daemon | 2 | {bio} |
bio-rainbow | 2 | {bio} |
bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
@@ -143,7 +142,6 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
murasaki | 2 | {bio} |
ncbi-vdb | 2 | {bio-dev} |
nutsqlite | 2 | {tools} |
- openslide | 2 | {imaging-dev} |
oscar | 2 | {practice,tools,data} |
patman | 2 | {bio} |
phast | 2 | {bio} |
@@ -171,7 +169,6 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
suitename | 2 | {bio} |
surankco | 2 | {bio} |
sweed | 2 | {bio} |
- tvc | 2 | {bio} |
yaha | 2 | {bio} |
atropos | 1 | {bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
@@ -189,6 +186,7 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
logol | 1 | {bio} |
nanook | 1 | {bio,covid-19} |
ngs-sdk | 1 | {bio-dev} |
+ openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
pbcopper | 1 | {bio-dev} |
pbdagcon | 1 | {bio} |
@@ -279,5 +277,5 @@ Last-Update: Fri, 03 Jul 2020 01:42:04 +0000
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {bio,covid-19} |
yanagiba | -1 | {bio,covid-19} |
-(306 rows)
+(304 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c124eb53c5afe9abe1e560fd26a8380d63d091ce
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c124eb53c5afe9abe1e560fd26a8380d63d091ce
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