Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
974faf10 by Andreas Tille at 2020-07-07T13:44:03+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,43 +1,43 @@
-Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
+Last-Update: Tue, 07 Jul 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 186 | {covid-19,imaging} |
- orthanc | 93 | {covid-19,imaging,practice} |
+ dcmtk | 189 | {covid-19,imaging} |
+ orthanc | 96 | {covid-19,imaging,practice} |
gdcm | 44 | {imaging-dev} |
- orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 32 | {bio-dev} |
- dcm2niix | 25 | {imaging} |
+ orthanc-wsi | 44 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ htsjdk | 30 | {bio-dev} |
dicom3tools | 24 | {imaging} |
- dicomscope | 24 | {imaging} |
- gdcm | 18 | {covid-19,imaging} |
+ dcm2niix | 23 | {imaging} |
+ dicomscope | 23 | {imaging} |
+ gnumed-server | 18 | {practice,covid-19} |
ngs-sdk | 18 | {bio-dev} |
- gnumed-server | 17 | {practice,covid-19} |
- invesalius | 15 | {imaging} |
- gdcm | 14 | {imaging-dev} |
- minc-tools | 13 | {imaging} |
+ gdcm | 16 | {covid-19,imaging} |
+ invesalius | 14 | {imaging} |
+ gdcm | 13 | {imaging-dev} |
pixelmed | 13 | {imaging} |
insighttoolkit4 | 12 | {imaging-dev} |
jebl2 | 12 | {bio-dev} |
- vtk-dicom | 12 | {imaging} |
- biosig4c++ | 10 | {physics,imaging} |
- openslide | 10 | {imaging} |
+ minc-tools | 12 | {imaging} |
+ vtk-dicom | 11 | {imaging} |
adun.app | 9 | {bio} |
+ biosig4c++ | 9 | {physics,imaging} |
libdivsufsort | 9 | {bio-dev} |
- psychopy | 9 | {psychology} |
+ openslide | 9 | {imaging} |
dicompyler | 8 | {oncology} |
king | 8 | {imaging,typesetting} |
lagan | 8 | {bio} |
melting | 8 | {bio,cloud} |
ngs-sdk | 8 | {bio-dev} |
plastimatch | 8 | {imaging} |
+ psychopy | 8 | {psychology} |
libminc | 7 | {imaging-dev} |
- librg-utils-perl | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
ea-utils | 6 | {bio} |
king-probe | 6 | {bio} |
+ librg-utils-perl | 6 | {bio} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
paraclu | 6 | {cloud,bio} |
anfo | 5 | {bio,cloud} |
@@ -76,7 +76,6 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
bandage | 3 | {bio} |
brig | 3 | {bio} |
busco | 3 | {covid-19,bio} |
- delly | 3 | {bio,covid-19} |
ecopcr | 3 | {bio} |
edtsurf | 3 | {bio} |
embassy-domainatrix | 3 | {cloud,bio} |
@@ -86,10 +85,10 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
ipig | 3 | {bio} |
libncl | 3 | {bio} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
- maffilter | 3 | {bio} |
mauve-aligner | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
microbegps | 3 | {bio} |
+ mrs | 3 | {bio} |
multiqc | 3 | {bio,covid-19} |
nutsqlite | 3 | {tools} |
perm | 3 | {cloud,bio} |
@@ -100,7 +99,6 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
relion | 3 | {bio} |
saint | 3 | {bio} |
salmon | 3 | {bio,covid-19} |
- segemehl | 3 | {bio} |
seqmagick | 3 | {covid-19,bio} |
seqsero | 3 | {bio} |
tnseq-transit | 3 | {covid-19,bio} |
@@ -123,6 +121,7 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
daligner | 2 | {bio-ngs,bio} |
dascrubber | 2 | {bio} |
dazzdb | 2 | {bio} |
+ delly | 2 | {bio,covid-19} |
dindel | 2 | {bio} |
dwgsim | 2 | {bio} |
estscan | 2 | {bio} |
@@ -136,9 +135,8 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
libctapimkt | 2 | {practice} |
libpal-java | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
+ maffilter | 2 | {bio} |
metaphlan2 | 2 | {bio} |
- mptp | 2 | {bio} |
- mrs | 2 | {bio} |
murasaki | 2 | {bio} |
ncbi-vdb | 2 | {bio-dev} |
oscar | 2 | {practice,tools,data} |
@@ -160,6 +158,7 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
samblaster | 2 | {covid-19,bio} |
samtools-legacy | 2 | {bio-dev} |
scrm | 2 | {bio} |
+ segemehl | 2 | {bio} |
seqan | 2 | {bio-dev} |
sga | 2 | {bio} |
sift | 2 | {bio} |
@@ -182,7 +181,7 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
libdisorder | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
- nanook | 1 | {bio,covid-19} |
+ ngs-sdk | 1 | {bio-dev} |
opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
@@ -248,7 +247,6 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
mssstest | 0 | {tools} |
murasaki | 0 | {bio} |
nanosv | 0 | {bio,covid-19} |
- ngs-sdk | 0 | {bio-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
@@ -256,8 +254,8 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
pilercr | 0 | {bio} |
python-py2bit | 0 | {bio,bio-dev} |
quicktree | 0 | {bio,covid-19,bio-phylogeny} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -276,5 +274,5 @@ Last-Update: Tue, 07 Jul 2020 01:42:04 +0000
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {bio,covid-19} |
yanagiba | -1 | {bio,covid-19} |
-(303 rows)
+(301 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/974faf103cdd4ce1ff3483e0dbc9289681b6646a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/974faf103cdd4ce1ff3483e0dbc9289681b6646a
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200707/c32852a3/attachment-0001.html>