[med-svn] [Git][med-team/spades][master] Extended description to help finding metaspades

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / spades


Commits:
4172b726 by Steffen Moeller at 2020-06-24T13:26:03+02:00
Extended description to help finding metaspades

- - - - -


1 changed file:

- debian/control


Changes:

=====================================
debian/control
=====================================
@@ -51,3 +51,19 @@ Description: genome assembler for single-cell and isolates data sets
  with Illumina or IonTorrent reads and is capable of providing hybrid
  assemblies using PacBio and Sanger reads. You can also provide
  additional contigs that will be used as long reads.
+ .
+ This package provides the following additional pipelines:
+  * metaSPAdes – a pipeline for metagenomic data sets
+  * plasmidSPAdes – a pipeline for extracting and assembling plasmids
+    from WGS data sets
+  * metaplasmidSPAdes – a pipeline for extracting and assembling
+    plasmids from metagenomic data sets
+  * rnaSPAdes – a de novo transcriptome assembler from RNA-Seq data
+  * truSPAdes – a module for TruSeq barcode assembly
+  * biosyntheticSPAdes – a module for biosynthetic gene cluster
+    assembly with paired-end reads
+ .
+ SPAdes provides several stand-alone binaries with relatively simple
+ command-line interface: k-mer counting (spades-kmercounter), assembly
+ graph construction (spades-gbuilder) and long read to graph aligner
+ (spades-gmapper).



View it on GitLab: https://salsa.debian.org/med-team/spades/-/commit/4172b726b5f77a72b44087aaaefd2a8951672a9f

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View it on GitLab: https://salsa.debian.org/med-team/spades/-/commit/4172b726b5f77a72b44087aaaefd2a8951672a9f
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