[med-svn] [Git][med-team/bcftools][master] 3 commits: Fix suggested Python packages

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bcftools


Commits:
603e4aa4 by Andreas Tille at 2020-07-14T22:20:54+02:00
Fix suggested Python packages

- - - - -
80e49cc0 by Andreas Tille at 2020-07-14T22:38:57+02:00
Make sure Python3 is used

- - - - -
f6cbc840 by Andreas Tille at 2020-07-14T22:42:11+02:00
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/2to3.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+bcftools (1.10.2-4) unstable; urgency=medium
+
+  * Fix suggested Python packages
+    Closes: #965032
+
+ -- Andreas Tille <tille at debian.org>  Tue, 14 Jul 2020 22:39:24 +0200
+
 bcftools (1.10.2-3) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -25,9 +25,9 @@ Depends: ${shlibs:Depends},
 Recommends: perl
 Suggests:
 # These are needed for plot-vcfstats
-          python,
-          python-numpy,
-          python-matplotlib,
+          python3,
+          python3-numpy,
+          python3-matplotlib,
           texlive-latex-recommended
 Breaks: samtools (<< 1.0)
 Replaces: samtools (<< 1.0)


=====================================
debian/patches/2to3.patch
=====================================
@@ -0,0 +1,34 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Tue, 14 Jul 2020 22:21:56 +0200
+Bug-Debian: https://bugs.debian.org/965032
+Description: Make sure Python3 is used
+
+diff --git a/misc/guess-ploidy.py b/misc/guess-ploidy.py
+index 6ad3d36..6792498 100755
+--- a/misc/guess-ploidy.py
++++ b/misc/guess-ploidy.py
+@@ -1,4 +1,4 @@
+-#!/usr/bin/env python
++#!/usr/bin/env python3
+ #
+ # Plot the output of "bcftools +guess-ploidy -v"
+ #
+@@ -24,7 +24,7 @@
+ # FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
+ # DEALINGS IN THE SOFTWARE.
+ 
+-from __future__ import print_function
++
+ 
+ import matplotlib as mpl
+ mpl.use('Agg')
+diff --git a/misc/plot-roh.py b/misc/plot-roh.py
+index 90dd63e..210f086 100755
+--- a/misc/plot-roh.py
++++ b/misc/plot-roh.py
+@@ -1,4 +1,4 @@
+-#!/usr/bin/env python
++#!/usr/bin/env python3
+ #  
+ #  The MIT License
+ #  


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 tests-pluginpath.patch
 skip_new_test_failing_on_32bit.patch
+2to3.patch



View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/460295209687734c243be802d3052b31241f3896...f6cbc84068345edae26d10749a1048081bb85415

-- 
View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/460295209687734c243be802d3052b31241f3896...f6cbc84068345edae26d10749a1048081bb85415
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