[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Wed Jul 15 14:44:27 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
71992b42 by Andreas Tille at 2020-07-15T13:44:23+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,44 +1,44 @@
-Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
+Last-Update: Wed, 15 Jul 2020 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    177 | {covid-19,imaging}                                  | 
- orthanc                       |     89 | {covid-19,imaging,practice}                         | 
- gdcm                          |     46 | {imaging-dev}                                       | 
- orthanc-wsi                   |     43 | {his,practice,covid-19,laboratory,imaging,oncology} | 
- htsjdk                        |     33 | {bio-dev}                                           | 
- dicom3tools                   |     24 | {imaging}                                           | 
- dcm2niix                      |     23 | {imaging}                                           | 
+ dcmtk                         |    176 | {covid-19,imaging}                                  | 
+ orthanc                       |     88 | {covid-19,imaging,practice}                         | 
+ gdcm                          |     47 | {imaging-dev}                                       | 
+ orthanc-wsi                   |     42 | {his,practice,covid-19,laboratory,imaging,oncology} | 
+ htsjdk                        |     32 | {bio-dev}                                           | 
+ dcm2niix                      |     22 | {imaging}                                           | 
+ dicom3tools                   |     22 | {imaging}                                           | 
  dicomscope                    |     20 | {imaging}                                           | 
  gnumed-server                 |     18 | {practice,covid-19}                                 | 
  ngs-sdk                       |     17 | {bio-dev}                                           | 
- gdcm                          |     13 | {imaging-dev}                                       | 
+ gdcm                          |     13 | {covid-19,imaging}                                  | 
  invesalius                    |     13 | {imaging}                                           | 
+ gdcm                          |     12 | {imaging-dev}                                       | 
  insighttoolkit4               |     12 | {imaging-dev}                                       | 
- gdcm                          |     11 | {covid-19,imaging}                                  | 
  jebl2                         |     11 | {bio-dev}                                           | 
+ pixelmed                      |     11 | {imaging}                                           | 
  minc-tools                    |     10 | {imaging}                                           | 
- pixelmed                      |     10 | {imaging}                                           | 
+ ngs-sdk                       |     10 | {bio-dev}                                           | 
+ adun.app                      |      9 | {bio}                                               | 
  lagan                         |      9 | {bio}                                               | 
- libdivsufsort                 |      9 | {bio-dev}                                           | 
- ngs-sdk                       |      9 | {bio-dev}                                           | 
- adun.app                      |      8 | {bio}                                               | 
+ psychopy                      |      9 | {psychology}                                        | 
+ vtk-dicom                     |      9 | {imaging}                                           | 
+ libdivsufsort                 |      8 | {bio-dev}                                           | 
  melting                       |      8 | {bio,cloud}                                         | 
+ openslide                     |      8 | {imaging}                                           | 
  orthanc-webviewer             |      8 | {imaging}                                           | 
- psychopy                      |      8 | {psychology}                                        | 
- vtk-dicom                     |      8 | {imaging}                                           | 
  biosig4c++                    |      7 | {physics,imaging}                                   | 
- dicompyler                    |      7 | {oncology}                                          | 
- openslide                     |      7 | {imaging}                                           | 
+ libminc                       |      7 | {imaging-dev}                                       | 
  orthanc-dicomweb              |      7 | {imaging,covid-19}                                  | 
  plastimatch                   |      7 | {imaging}                                           | 
  stacks                        |      7 | {bio}                                               | 
  treeview                      |      7 | {bio-phylogeny,bio}                                 | 
  biojava-live                  |      6 | {bio-dev}                                           | 
  biomaj3-cli                   |      6 | {cloud}                                             | 
+ dicompyler                    |      6 | {oncology}                                          | 
  ea-utils                      |      6 | {bio}                                               | 
  king                          |      6 | {imaging,typesetting}                               | 
- libminc                       |      6 | {imaging-dev}                                       | 
  librg-utils-perl              |      6 | {bio}                                               | 
  orthanc-mysql                 |      6 | {imaging}                                           | 
  paraclu                       |      6 | {cloud,bio}                                         | 
@@ -69,7 +69,6 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  nutsqlite                     |      4 | {tools}                                             | 
  piler                         |      4 | {bio}                                               | 
  predictprotein                |      4 | {bio}                                               | 
- qrisk2                        |      4 | {practice}                                          | 
  scythe                        |      4 | {bio}                                               | 
  spread-phy                    |      4 | {bio-phylogeny,bio}                                 | 
  squizz                        |      4 | {bio,cloud}                                         | 
@@ -96,6 +95,7 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  placnet                       |      3 | {bio}                                               | 
  proalign                      |      3 | {bio-phylogeny,bio}                                 | 
  probabel                      |      3 | {cloud,bio}                                         | 
+ qrisk2                        |      3 | {practice}                                          | 
  rdp-classifier                |      3 | {bio}                                               | 
  relion                        |      3 | {bio}                                               | 
  runcircos-gui                 |      3 | {bio}                                               | 
@@ -111,6 +111,7 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  beast2-mcmc                   |      2 | {bio}                                               | 
  beast-mcmc                    |      2 | {bio-phylogeny,bio}                                 | 
  bio-rainbow                   |      2 | {bio}                                               | 
+ biosig4c++                    |      2 | {physics,imaging-dev}                               | 
  bio-tradis                    |      2 | {bio-dev,bio}                                       | 
  bitseq                        |      2 | {bio}                                               | 
  blasr                         |      2 | {bio,bio-ngs}                                       | 
@@ -122,7 +123,6 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  dazzdb                        |      2 | {bio}                                               | 
  delly                         |      2 | {bio,covid-19}                                      | 
  dindel                        |      2 | {bio}                                               | 
- dwgsim                        |      2 | {bio}                                               | 
  estscan                       |      2 | {bio}                                               | 
  fastml                        |      2 | {bio}                                               | 
  fsm-lite                      |      2 | {bio}                                               | 
@@ -168,6 +168,7 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  surankco                      |      2 | {bio}                                               | 
  sweed                         |      2 | {bio}                                               | 
  yaha                          |      2 | {bio}                                               | 
+ acedb                         |      1 | {cloud,bio}                                         | 
  biosig4c++                    |      1 | {physics,imaging-dev}                               | 
  blimps                        |      1 | {bio}                                               | 
  cat-bat                       |      1 | {bio,covid-19}                                      | 
@@ -195,7 +196,6 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  trace2dbest                   |      1 | {bio}                                               | 
  velvetoptimiser               |      1 | {bio}                                               | 
  volpack                       |      1 | {imaging-dev}                                       | 
- acedb                         |      0 | {cloud,bio}                                         | 
  atropos                       |      0 | {bio}                                               | 
  augur                         |      0 | {covid-19,bio}                                      | 
  bambamc                       |      0 | {bio-dev}                                           | 
@@ -251,8 +251,8 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  pbseqlib                      |      0 | {bio-dev}                                           | 
  pilercr                       |      0 | {bio}                                               | 
  quicktree                     |      0 | {bio,covid-19,bio-phylogeny}                        | 
- relion                        |      0 | {bio}                                               | 
  relion                        |      0 | {bio-dev}                                           | 
+ relion                        |      0 | {bio}                                               | 
  sambamba                      |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  seq-gen                       |      0 | {bio}                                               | 
@@ -268,8 +268,9 @@ Last-Update: Wed, 15 Jul 2020 01:42:03 +0000
  vtk-dicom                     |      0 | {imaging-dev}                                       | 
  wtdbg2                        |      0 | {covid-19}                                          | 
  bustools                      |     -1 | {bio,covid-19}                                      | 
+ pplacer                       |     -1 | {bio-phylogeny,covid-19,bio}                        | 
  pycoqc                        |     -1 | {covid-19,bio}                                      | 
  shovill                       |     -1 | {bio,covid-19}                                      | 
  yanagiba                      |     -1 | {bio,covid-19}                                      | 
-(298 rows)
+(299 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/71992b42d44f767fcfdd492882ac5693b109c122

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/71992b42d44f767fcfdd492882ac5693b109c122
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