Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
35aaf5aa by Andreas Tille at 2020-07-16T13:44:33+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,45 +1,43 @@
-Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
+Last-Update: Thu, 16 Jul 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 176 | {covid-19,imaging} |
+ dcmtk | 171 | {covid-19,imaging} |
orthanc | 88 | {covid-19,imaging,practice} |
- gdcm | 47 | {imaging-dev} |
- orthanc-wsi | 42 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 32 | {bio-dev} |
+ gdcm | 46 | {imaging-dev} |
+ orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ htsjdk | 31 | {bio-dev} |
dcm2niix | 22 | {imaging} |
dicom3tools | 22 | {imaging} |
- dicomscope | 20 | {imaging} |
+ dicomscope | 19 | {imaging} |
gnumed-server | 18 | {practice,covid-19} |
- ngs-sdk | 17 | {bio-dev} |
+ ngs-sdk | 15 | {bio-dev} |
gdcm | 13 | {covid-19,imaging} |
+ insighttoolkit4 | 13 | {imaging-dev} |
invesalius | 13 | {imaging} |
gdcm | 12 | {imaging-dev} |
- insighttoolkit4 | 12 | {imaging-dev} |
- jebl2 | 11 | {bio-dev} |
- pixelmed | 11 | {imaging} |
+ pixelmed | 12 | {imaging} |
+ jebl2 | 10 | {bio-dev} |
minc-tools | 10 | {imaging} |
- ngs-sdk | 10 | {bio-dev} |
adun.app | 9 | {bio} |
lagan | 9 | {bio} |
+ ngs-sdk | 9 | {bio-dev} |
psychopy | 9 | {psychology} |
vtk-dicom | 9 | {imaging} |
libdivsufsort | 8 | {bio-dev} |
melting | 8 | {bio,cloud} |
openslide | 8 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
+ plastimatch | 8 | {imaging} |
biosig4c++ | 7 | {physics,imaging} |
+ dicompyler | 7 | {oncology} |
libminc | 7 | {imaging-dev} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
- plastimatch | 7 | {imaging} |
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
biojava-live | 6 | {bio-dev} |
biomaj3-cli | 6 | {cloud} |
- dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
- king | 6 | {imaging,typesetting} |
- librg-utils-perl | 6 | {bio} |
orthanc-mysql | 6 | {imaging} |
paraclu | 6 | {cloud,bio} |
anfo | 5 | {bio,cloud} |
@@ -47,8 +45,9 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
biomaj3-daemon | 5 | {bio} |
fastlink | 5 | {cloud,bio} |
getdata | 5 | {bio} |
+ king | 5 | {imaging,typesetting} |
+ librg-utils-perl | 5 | {bio} |
mlv-smile | 5 | {bio,cloud} |
- ncbi-seg | 5 | {bio} |
obitools | 5 | {bio} |
orthanc-postgresql | 5 | {imaging} |
phyutility | 5 | {bio,cloud} |
@@ -65,19 +64,16 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
mhap | 4 | {bio-ngs,bio} |
mipe | 4 | {cloud,bio} |
mrs | 4 | {bio} |
+ ncbi-seg | 4 | {bio} |
neobio | 4 | {cloud,bio} |
nutsqlite | 4 | {tools} |
piler | 4 | {bio} |
- predictprotein | 4 | {bio} |
+ qrisk2 | 4 | {practice} |
scythe | 4 | {bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
- squizz | 4 | {bio,cloud} |
- staden | 4 | {bio} |
transtermhp | 4 | {bio} |
alter-sequence-alignment | 3 | {bio} |
- ampliconnoise | 3 | {cloud,bio} |
bandage | 3 | {bio} |
- brig | 3 | {bio} |
busco | 3 | {covid-19,bio} |
daligner | 3 | {bio-ngs,bio} |
ecopcr | 3 | {bio} |
@@ -92,29 +88,31 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
microbegps | 3 | {bio} |
multiqc | 3 | {bio,covid-19} |
perm | 3 | {cloud,bio} |
- placnet | 3 | {bio} |
+ predictprotein | 3 | {bio} |
proalign | 3 | {bio-phylogeny,bio} |
probabel | 3 | {cloud,bio} |
- qrisk2 | 3 | {practice} |
rdp-classifier | 3 | {bio} |
relion | 3 | {bio} |
runcircos-gui | 3 | {bio} |
saint | 3 | {bio} |
salmon | 3 | {bio,covid-19} |
seqmagick | 3 | {covid-19,bio} |
+ squizz | 3 | {bio,cloud} |
+ staden | 3 | {bio} |
tnseq-transit | 3 | {covid-19,bio} |
tracetuner | 3 | {bio} |
tvc | 3 | {bio} |
+ ampliconnoise | 2 | {cloud,bio} |
arden | 2 | {bio,cloud} |
assemblytics | 2 | {bio} |
baitfisher | 2 | {bio} |
beast2-mcmc | 2 | {bio} |
beast-mcmc | 2 | {bio-phylogeny,bio} |
bio-rainbow | 2 | {bio} |
- biosig4c++ | 2 | {physics,imaging-dev} |
bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
blasr | 2 | {bio,bio-ngs} |
+ brig | 2 | {bio} |
canu | 2 | {bio} |
centrifuge | 2 | {bio,covid-19} |
clonalframeml | 2 | {bio,covid-19} |
@@ -143,6 +141,7 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
pbdagcon | 2 | {bio} |
phast | 2 | {bio} |
phybin | 2 | {bio} |
+ placnet | 2 | {bio} |
prime-phylo | 2 | {bio,cloud} |
prottest | 2 | {bio-phylogeny,bio} |
pscan-chip | 2 | {bio} |
@@ -188,7 +187,6 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
plasmidseeker | 1 | {bio} |
q2templates | 1 | {bio} |
rambo-k | 1 | {bio} |
- relion | 1 | {bio} |
seqan | 1 | {bio-dev} |
sift | 1 | {bio} |
stringtie | 1 | {bio,covid-19} |
@@ -272,5 +270,5 @@ Last-Update: Thu, 16 Jul 2020 01:42:04 +0000
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {bio,covid-19} |
yanagiba | -1 | {bio,covid-19} |
-(299 rows)
+(297 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/35aaf5aa763b8422a635f36590e0e1344f533ebd
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/35aaf5aa763b8422a635f36590e0e1344f533ebd
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